Literature DB >> 27359215

Xenogeneic Silencing and Its Impact on Bacterial Genomes.

Kamna Singh1, Joshua N Milstein2,3, William Wiley Navarre1.   

Abstract

The H-NS (heat-stable nucleoid structuring) protein affects both nucleoid compaction and global gene regulation. H-NS appears to act primarily as a silencer of AT-rich genetic material acquired by horizontal gene transfer. As such, it is key in the regulation of most genes involved in virulence and in adaptation to new environmental niches. Here we review recent progress in understanding the biochemistry of H-NS and how xenogeneic silencing affects bacterial evolution. We highlight the strengths and weaknesses of some of the models proposed in H-NS-mediated nucleoprotein complex formation. Based on recent single-molecule studies, we also propose a novel mode of DNA compaction by H-NS termed intrabridging to explain over two decades of observations of the H-NS molecule.

Keywords:  H-NS; genome evolution; horizontal gene transfer; nucleoid-associated proteins; xenogeneic silencing

Mesh:

Substances:

Year:  2016        PMID: 27359215     DOI: 10.1146/annurev-micro-102215-095301

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  39 in total

1.  The transcription regulator and c-di-GMP phosphodiesterase PdeL represses motility in Escherichia coli.

Authors:  Cihan Yilmaz; Aathmaja Anandhi Rangarajan; Karin Schnetz
Journal:  J Bacteriol       Date:  2020-12-14       Impact factor: 3.490

2.  Growth Phase-Dependent Chromosome Condensation and Heat-Stable Nucleoid-Structuring Protein Redistribution in Escherichia coli under Osmotic Stress.

Authors:  Nafiseh Rafiei; Martha Cordova; William Wiley Navarre; Joshua N Milstein
Journal:  J Bacteriol       Date:  2019-11-05       Impact factor: 3.490

Review 3.  Trouble is coming: Signaling pathways that regulate general stress responses in bacteria.

Authors:  Susan Gottesman
Journal:  J Biol Chem       Date:  2019-06-13       Impact factor: 5.157

4.  Revised role for Hfq bacterial regulator on DNA topology.

Authors:  Antoine Malabirade; David Partouche; Omar El Hamoui; Florian Turbant; Frédéric Geinguenaud; Pierre Recouvreux; Thomas Bizien; Florent Busi; Frank Wien; Véronique Arluison
Journal:  Sci Rep       Date:  2018-11-14       Impact factor: 4.379

Review 5.  Impact of Xenogeneic Silencing on Phage-Host Interactions.

Authors:  Eugen Pfeifer; Max Hünnefeld; Ovidiu Popa; Julia Frunzke
Journal:  J Mol Biol       Date:  2019-02-21       Impact factor: 5.469

6.  Distinct heterochromatin-like domains promote transcriptional memory and silence parasitic genetic elements in bacteria.

Authors:  Haley M Amemiya; Thomas J Goss; Taylor M Nye; Rebecca L Hurto; Lyle A Simmons; Peter L Freddolino
Journal:  EMBO J       Date:  2021-12-28       Impact factor: 11.598

7.  Salmonella expresses foreign genes during infection by degrading their silencer.

Authors:  Jeongjoon Choi; Eduardo A Groisman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-24       Impact factor: 11.205

8.  H-NS uses an autoinhibitory conformational switch for environment-controlled gene silencing.

Authors:  Umar F Shahul Hameed; Chenyi Liao; Anand K Radhakrishnan; Franceline Huser; Safia S Aljedani; Xiaochuan Zhao; Afaque A Momin; Fernando A Melo; Xianrong Guo; Claire Brooks; Yu Li; Xuefeng Cui; Xin Gao; John E Ladbury; Łukasz Jaremko; Mariusz Jaremko; Jianing Li; Stefan T Arold
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

9.  Waking the neighbours: disruption of H-NS repression by overlapping transcription.

Authors:  Joseph T Wade; David C Grainger
Journal:  Mol Microbiol       Date:  2018-03-23       Impact factor: 3.501

10.  Horizontally acquired AT-rich genes in Escherichia coli cause toxicity by sequestering RNA polymerase.

Authors:  Lisa E Lamberte; Gabriele Baniulyte; Shivani S Singh; Anne M Stringer; Richard P Bonocora; Mathew Stracy; Achillefs N Kapanidis; Joseph T Wade; David C Grainger
Journal:  Nat Microbiol       Date:  2017-01-09       Impact factor: 17.745

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