Literature DB >> 27357447

Developmental transcription factor NFIB is a putative target of oncofetal miRNAs and is associated with tumour aggressiveness in lung adenocarcinoma.

Daiana D Becker-Santos1, Kelsie L Thu2, John C English3, Larissa A Pikor2, Victor D Martinez2, May Zhang2, Emily A Vucic2, Margaret Ty Luk3, Anita Carraro2, Jagoda Korbelik2, Daniela Piga2, Nicolas M Lhomme2, Mike J Tsay4, John Yee5, Calum E MacAulay2, Stephen Lam2, William W Lockwood2, Wendy P Robinson6, Igor Jurisica4,7, Wan L Lam2.   

Abstract

Genes involved in fetal lung development are thought to play crucial roles in the malignant transformation of adult lung cells. Consequently, the study of lung tumour biology in the context of lung development has the potential to reveal key developmentally relevant genes that play critical roles in lung cancer initiation/progression. Here, we describe for the first time a comprehensive characterization of miRNA expression in human fetal lung tissue, with subsequent identification of 37 miRNAs in non-small cell lung cancer (NSCLC) that recapitulate their fetal expression patterns. Nuclear factor I/B (NFIB), a transcription factor essential for lung development, was identified as a potential frequent target for these 'oncofetal' miRNAs. Concordantly, analysis of NFIB expression in multiple NSCLC independent cohorts revealed its recurrent underexpression (in ∼40-70% of tumours). Interrogation of NFIB copy number, methylation, and mutation status revealed that DNA level disruption of this gene is rare, and further supports the notion that oncofetal miRNAs are likely the primary mechanism responsible for NFIB underexpression in NSCLC. Reflecting its functional role in regulating lung differentiation, low expression of NFIB was significantly associated with biologically more aggressive subtypes and, ultimately, poorer survival in lung adenocarcinoma patients.
Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd. Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Entities:  

Keywords:  lineage transcription factors; lung adenocarcinoma (LUAD); lung development; miRNA sequencing; miRNAs

Mesh:

Substances:

Year:  2016        PMID: 27357447     DOI: 10.1002/path.4765

Source DB:  PubMed          Journal:  J Pathol        ISSN: 0022-3417            Impact factor:   7.996


  16 in total

1.  Integrated Microarray to Identify the Hub miRNAs and Constructed miRNA-mRNA Network in Neuroblastoma Via Bioinformatics Analysis.

Authors:  Bo Chen; Zhongyan Hua; Xiuni Qin; Zhijie Li
Journal:  Neurochem Res       Date:  2020-10-26       Impact factor: 3.996

2.  Nfib hemizygous mice are protected from hyperoxic lung injury and death.

Authors:  Vasantha H S Kumar; Joseph Chaker El Khoury; Richard Gronostajski; Huamei Wang; Lori Nielsen; Rita M Ryan
Journal:  Physiol Rep       Date:  2017-08

3.  Diagnostic MicroRNA Biomarker Discovery for Non-Small-Cell Lung Cancer Adenocarcinoma by Integrative Bioinformatics Analysis.

Authors:  Yang Shao; Bin Liang; Fei Long; Shu-Juan Jiang
Journal:  Biomed Res Int       Date:  2017-06-15       Impact factor: 3.411

4.  Deregulation of small non-coding RNAs at the DLK1-DIO3 imprinted locus predicts lung cancer patient outcome.

Authors:  Katey S S Enfield; Victor D Martinez; Erin A Marshall; Greg L Stewart; Sonia H Y Kung; Jhon R Enterina; Wan L Lam
Journal:  Oncotarget       Date:  2016-12-06

Review 5.  Nuclear Factor I/B: A Master Regulator of Cell Differentiation with Paradoxical Roles in Cancer.

Authors:  Daiana D Becker-Santos; Kim M Lonergan; Richard M Gronostajski; Wan L Lam
Journal:  EBioMedicine       Date:  2017-05-27       Impact factor: 8.143

6.  Differentially expressed microRNAs in lung adenocarcinoma invert effects of copy number aberrations of prognostic genes.

Authors:  Tomas Tokar; Chiara Pastrello; Varune R Ramnarine; Chang-Qi Zhu; Kenneth J Craddock; Larrisa A Pikor; Emily A Vucic; Simon Vary; Frances A Shepherd; Ming-Sound Tsao; Wan L Lam; Igor Jurisica
Journal:  Oncotarget       Date:  2018-01-08

7.  Prognostic significance of NFIA and NFIB in esophageal squamous carcinoma and esophagogastric junction adenocarcinoma.

Authors:  Bo Yang; Zhi-Hang Zhou; Li Chen; Xiang Cui; Jun-Yan Hou; Kai-Jie Fan; Si-Hao Han; Peng Li; Shao-Qiong Yi; Yang Liu
Journal:  Cancer Med       Date:  2018-03-25       Impact factor: 4.452

8.  Small non-coding RNA transcriptome of the NCI-60 cell line panel.

Authors:  Erin A Marshall; Adam P Sage; Kevin W Ng; Victor D Martinez; Natalie S Firmino; Kevin L Bennewith; Wan L Lam
Journal:  Sci Data       Date:  2017-10-24       Impact factor: 6.444

9.  Reactivation of Multiple Fetal miRNAs in Lung Adenocarcinoma.

Authors:  David E Cohn; Mateus C Barros-Filho; Brenda C Minatel; Michelle E Pewarchuk; Erin A Marshall; Emily A Vucic; Adam P Sage; Nikita Telkar; Greg L Stewart; Igor Jurisica; Patricia P Reis; Wendy P Robinson; Wan L Lam
Journal:  Cancers (Basel)       Date:  2021-05-29       Impact factor: 6.639

10.  Tumor-based gene expression biomarkers to predict survival following curative intent resection for stage I lung adenocarcinoma.

Authors:  Alisson Clemenceau; Nathalie Gaudreault; Cyndi Henry; Paula A Ugalde; Catherine Labbé; Michel Laviolette; Philippe Joubert; Yohan Bossé
Journal:  PLoS One       Date:  2018-11-20       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.