Literature DB >> 27350691

Three duplication events and variable molecular evolution characteristics involved in multiple GGPS genes of six Solanaceae species.

Feng Li1, Chun Yang Wei, Chan Qiao, Zhenxi Chen, Peng Wang, Pan Wei, Ran Wang, Lifeng Jin, Jun Yang, Fucheng Lin, Zhaopeng Luo.   

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Year:  2016        PMID： 27350691     DOI： 10.1007/s12041-016-0634-1

Source DB:  PubMed          Journal:  J Genet        ISSN： 0022-1333            Impact factor:   1.166


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  19 in total

1.  Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages.

Authors:  Ziheng Yang; Rasmus Nielsen
Journal:  Mol Biol Evol       Date:  2002-06       Impact factor: 16.240

2.  A profile hidden Markov model for signal peptides generated by HMMER.

Authors:  Zemin Zhang; William I Wood
Journal:  Bioinformatics       Date:  2003-01-22       Impact factor: 6.937

3.  ProbCons: Probabilistic consistency-based multiple sequence alignment.

Authors:  Chuong B Do; Mahathi S P Mahabhashyam; Michael Brudno; Serafim Batzoglou
Journal:  Genome Res       Date:  2005-02       Impact factor: 9.043

4.  PAML 4: phylogenetic analysis by maximum likelihood.

Authors:  Ziheng Yang
Journal:  Mol Biol Evol       Date:  2007-05-04       Impact factor: 16.240

5.  A draft genome sequence of Nicotiana benthamiana to enhance molecular plant-microbe biology research.

Authors:  Aureliano Bombarely; Hernan G Rosli; Julia Vrebalov; Peter Moffett; Lukas A Mueller; Gregory B Martin
Journal:  Mol Plant Microbe Interact       Date:  2012-12       Impact factor: 4.171

6.  Cloning and functional expression of a cDNA encoding geranylgeranyl diphosphate synthase from Taxus canadensis and assessment of the role of this prenyltransferase in cells induced for taxol production.

Authors:  J Hefner; R E Ketchum; R Croteau
Journal:  Arch Biochem Biophys       Date:  1998-12-01       Impact factor: 4.013

7.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

8.  SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information.

Authors:  Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano Gallo Cassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede
Journal:  Nucleic Acids Res       Date:  2014-04-29       Impact factor: 16.971

9.  Draft genome sequence of eggplant (Solanum melongena L.): the representative solanum species indigenous to the old world.

Authors:  Hideki Hirakawa; Kenta Shirasawa; Koji Miyatake; Tsukasa Nunome; Satomi Negoro; Akio Ohyama; Hirotaka Yamaguchi; Shusei Sato; Sachiko Isobe; Satoshi Tabata; Hiroyuki Fukuoka
Journal:  DNA Res       Date:  2014-09-18       Impact factor: 4.458

10.  The tobacco genome sequence and its comparison with those of tomato and potato.

Authors:  Nicolas Sierro; James N D Battey; Sonia Ouadi; Nicolas Bakaher; Lucien Bovet; Adrian Willig; Simon Goepfert; Manuel C Peitsch; Nikolai V Ivanov
Journal:  Nat Commun       Date:  2014-05-08       Impact factor: 14.919
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  1 in total

1.  Chromosome-scale assembly and population diversity analyses provide insights into the evolution of Sapindus mukorossi.

Authors:  Ting Xue; Duo Chen; Tianyu Zhang; Youqiang Chen; Huihua Fan; Yunpeng Huang; Quanlin Zhong; Baoyin Li
Journal:  Hortic Res       Date:  2022-01-05       Impact factor: 7.291
  1 in total

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