| Literature DB >> 27349742 |
Gopinath Kasetty1, Emanuel Smeds2, Emelie Holmberg2, Louise Wrange2, Selvi Adikesavan3,4, Praveen Papareddy5.
Abstract
BACKGROUND: Tissue factor pathway inhibitor-2 (TFPI-2) is a serine protease inhibitor that exerts multiple physiological and patho-physiological activities involving the modulation of coagulation, angiogenesis, tumor invasion, and apoptosis. In previous studies we reported a novel role of human TFPI-2 in innate immunity by serving as a precursor for host defense peptides. Here we employed a number of TFPI-2 derived peptides from different vertebrate species and found that their antibacterial activity is evolutionary conserved although the amino acid sequence is not well conserved. We further studied the theraputic potential of one selected TFPI-2 derived peptide (mouse) in a murine sepsis model.Entities:
Keywords: Antimicrobial; Coagulation; Complement; Evolution; Peptide; Sepsis; TFPI-2; Vertebrates
Mesh:
Substances:
Year: 2016 PMID: 27349742 PMCID: PMC4924314 DOI: 10.1186/s12866-016-0750-3
Source DB: PubMed Journal: BMC Microbiol ISSN: 1471-2180 Impact factor: 3.605
Fig. 1Phylogenetic tree analysis of the C-terminal region of TFPI-2 from vertebrates. Phylogenetic tree from 72 vertebrate TFPI-2 species was constructed using Neighbour-Joining tree with 1000 bootstrap replications on MEGA6
Fig. 2Sequence homology of the C-terminal region of TFPI-2. ClustalW multiple sequence alignment of TFPI-2 where identical and similar amino acids in all sequences are highlighted in black and grey shaded, respectively
Multiple sequence alignment of vertebrate TFPI-2 C-terminal region showing identical and similar amino acids
| Entry & name | Latin & name | English & name | Protein & sequence | Net & charge |
|---|---|---|---|---|
| MAMMALS | ||||
| P48307 |
| Human | CAKALKKKKKMPKLRFASRIRKIRKKQF | 14 |
| H2QUX8 |
| Chimpanzee | CAKALKKKKKMPKLRFASRIRKIRKKQF | 14 |
| U3ENJ1 |
| White-tufted-ear marmoset | CEKALKKQRKMPKIPFSNRNLKIWKKQF | 9 |
| F7CWN2 |
| Rhesus macaque | CAKALKRKKKIPKFRFASRIRKIRKKQF | 14 |
| XP_003896360.1 |
| Olive baboon | CAKALKRKKKIPKFRFASRIRKIRKKQF | 14 |
| H2PMX0 |
| Sumatran orangutan | CAKALRKKKKMPKLRFASRIRKIRKKQF | 14 |
| G3QPC8 |
| Western lowland gorilla | CAKALKRKKKMPKLRFASRIRKIRKKQF | 14 |
| XP_008067041.1 |
| Philippine tarsier | CVKVLKKKTKVPKLLFANRRRKMQKKQF | 12 |
| H0XT57 |
| Small-eared galago | CAKALKKEKNKTMPKLPFVNRILKVRK | 9 |
| O35536 |
| Mouse | CVKGWKKPKRWKIGDFLPRFWKHLS | 7 |
| XP_005363735.1 |
| Prairie Vole | CVKAPKKPKKRKTGSGFRIRTKPRRWTP | 12 |
| XP_004602345.1 |
| European shrew | CANAMKKYKIKKLQRRHPSRRRSLKIKK | 13 |
| EDL84392.1 |
| Brown Rat | CVKALKKPKRRKIGDFLPRFWKLRS | 9 |
| XP_010601797.1 |
| Damaraland Mole Rat | CEKAYKRGKRKTQKPPFSIKRPKSWRKR | 12 |
| H0VU83 |
| Guinea pig | CEKAYKRGKRKTQIPPFSIRRPKSWKKV | 10 |
| XP_007522577.1 |
| Western European Hedgehog | CAKASKKGKIRKMPRGILVNRRETYKKK | 11 |
| XP_011361893.1 |
| Large Flying Fox | CIKALKKKQNKKMPKILFVNRNLKMQKK | 11 |
| G1PX03 |
| Little brown bat | CMKALRKKINKKMPRFFFPDRRRKLQKK | 12 |
| XP_006834353.1 |
| Cape Golden Mole | CTLALKKENNKKMRKSFITNRRLKMRKR | 11 |
| XP_008569808.1 |
| Sunda flying lemur | CAKVKKGKNKKILKFPFVVRNLKFRKKK | 13 |
| XP_004475751.1 |
| Nine-banded Armadillo | CENALKKEKKKKIPKGFFAIRRPKIQKK | 10 |
| W5NS10 |
| Sheep | CVKALKKEKNKKMPRLLFANRRLKIKKQ | 11 |
| M3X7K4 |
| Cat | CVKALKKEKNKKMPKLFFANRRLKIWKR | 11 |
| G3THG9 |
| African elephant | CTKALKKKKKIQKPLFANRSPQIRK | 10 |
| F1SFC1 |
| Pig | CVKALKKEKKMPRLLLASRRLKIKKKQF | 11 |
| E2RBF0 |
| Dog | CVKALKKERNKKMTKLSLVNRRLKNWKK | 11 |
| G1MHA9 |
| Giant panda | CVKGSRNEKNMQLLKTVFPRRRLKTYKN | 8 |
| Q7YRQ8 |
| Bovine | CVKALKKEKNKKMPRLLLANRRLKIKKK | 12 |
| XP_008684473.1 |
| Polar bear | CVKGSRKEKNMKLLKTVFPGRRLKTYKK | 10 |
| XP_008542988.1 |
| Przewalski’s horse | CAKGLKKKKNKKMKTLFLANRSLKLQKK | 12 |
| XP_007938042.1 |
| Aardvark | CVGFSLKKEKRKKIQKVLFANRRLKIRK | 11 |
| XP_007076762.1 |
| Amur Tiger | CVKALKKEKNKKMPKLFFANKRLKIWKR | 11 |
| XP_004431409.1 |
| Southern White Rhinoceros | CTKALKKKKNRKMPKLFLANRSLKLRRK | 13 |
| XP_004386213.1 |
| Florida manatee | CAKALKKKKKKIRKFVLASRSLKLQKKQ | 13 |
| XP_006733001.1 |
| Weddell seal | CIKAVRKQKDKKTPKIVFAHRRVKTWKK | 11 |
| XP_007450700.1 |
| Yangtze River dolphin | CVKALKKGKNKKMPKLLFASRRLKIKKK | 13 |
| XP_004265641.1 |
| Killer Whale | CVKALKKGKNKKMPKLLFASRRLKIKKK | 13 |
| BIRDS | ||||
| XP_010710984 |
| Wild Turkey | CKKGSQKPTISKPRNLLRRKMMRKLIKK | 12 |
| XP_009328855.1 |
| Adélie penguin | CRKGTQKPRINKPMNVFRRKVMRKLIKK | 12 |
| XP_010560815 |
| Bald eagle | CRKAGTQKPRINKPTNVFRRKMMRKLIK | 11 |
| XP_005228880.1 |
| Peregrine falcon | CRKGTQKPRINKPANVFRRKMMRKLTKK | 12 |
| XP_009934468.1 |
| Hoatzin | CRKGTEKPRINKPTNVFRRKMMRKLVKK | 11 |
| XP_009893654.1 |
| Killdeer | CRKAGAQKPRIDKPTNVFRRKMMRKLIK | 10 |
| XP_009639692.1 |
| Little egret | CRKGTEKPGINKPMNVFRRKMMRKLTKK | 10 |
| XP_009672625.1 |
| Ostrich | CRKGSEKPRINKPANLLRRKMMRKLIKK | 11 |
| XP_009464906.1 |
| Crested Ibis | CRKGTEKPRINKPTNVFRRKMMRKLIKK | 11 |
| XP_009084577.1 |
| Atlantic canary | CRKAGNQKPSINKPTNLSRRKIVRKLKK | 11 |
| XP_008919443.1 |
| Golden-collared manakin | CRKGTQKPRINKPMSVSRRKIMRKLIKK | 12 |
| XP_008492487.1 |
| Anna’s hummingbird | CRKAGTQKPKINKPVNGVRRKMMIKLIK | 11 |
| XP_005518860.1 |
| Ground tit | CGKGNQKLRINKPTNVSRRKIVRKLIEK | 9 |
| XP_005152979.1 |
| Budgerigar | CRKGTQKPGINKPMNVFRRKMMRKLVKK | 11 |
| XP_005041216.1 |
| The collared flycatcher | CRNAGNQKLRINKPTNVSRRKLVRKLIK | 10 |
| XP_005010988.1 |
| Mallard | CGKAGSQKPAMKKSTDVFRRKMMRKLIK | 9 |
| XP_418662.2 |
| Chicken | CRKGSQKPTINKSRSLLRRKMMRKLIKK | 12 |
| XP_005418689.1 |
| Medium ground finch | CRNGNQKPGINKPTNLSRRKIVRKLKKK | 11 |
| XP_005480303.1 |
| White-throated Sparrow | CRNAGNQKPAINKPANLSRRKIVRKLKK | 10 |
| REPTILES | ||||
| XP_005308608.1 |
| Western painted turtle | CKKAGSKKSSFKKSRNKLPKTMRKLPEK | 11 |
| XP_006258519.1 |
| American Alligator | CRKAGNKKPRIKPKSKVMRKMMRKLQKN | 13 |
| AMPHIBIANS | ||||
| Q5FVY6 |
| Western clawed frog | CKKGSKRPRNRNRIRVPRIQS | 9 |
| FISHES | ||||
| XP_010889816.1 |
| The northern pike | CAKAGKLWKTKNPVTKTAMMKIPKKRSR | 10 |
| XP_010739844.1 |
| Croceine croaker | CAKGGKKYKRQGKGRRMRRYRNNNITFL | 11 |
| XP_008419957.1 |
| Guppy | CVRGPKRHSSHGKLRRLRQNRNNHLPLH | 8 |
| XP_008329541.1 |
| Cynoglossus | CVKGEKKHTGQGMIRRLRRNKNNSIFVV | 7 |
| XP_008287494.1 |
| Bicolor damselfish | CVKGAKKQTGQGKGRRMRRNRHNHITFL | 9 |
| XP_007259866.1 |
| Astyanax mexicanus | CARKSKPGKMRRKLIPRKPERRI | 10 |
| C3KHI5 |
| Sablefish | CVTGRKHTIQSKGRRLRRNRINRITFRQ | 10 |
| Q1WCN6 |
| Zebrafish | CGSKRWSPTKKSVRVSKQYLRRVKPQPS | 9 |
| I3JXJ8 |
| Nile tilapia | CAKGWKKHPGRGKILRSRKNRKLVTFLQ | 10 |
| XP_003969359.1 |
| Japanese Puffer | CVRGRKIRTREGKTNPLRRNRNNRITFM | 9 |
| XP_004073873.1 |
| Japanese Rice Fish | CLKGAKKHTGLKGRDRLMKRNKKTRFMA | 10 |
| XP_010772945.1 |
| Black Rock Cod | CARRGKKLTSQVKGRRKRRNRNNRITFL | 12 |
| XP_007903512.1 |
| Australian Ghostshark | CQKRNKKKTSQKYPTASITRKVVKKNSR | 11 |
Fig. 3Antimicrobial activities of TFPI-2 C-terminal derived peptides from different species. For determination of antimicrobial activities, E. coli ATCC 25922 and P. aeruginosa ATCC 27853 (4 × 106 cfu) were inoculated in 0.1 % TSB agarose gel. Each 4 mm-diameter well was loaded with 6 μl of peptide (at 100 μM). The zones of clearance (in mm) correspond to the inhibitory effect of each peptide after incubation at 37 °C for 18–24 h (mean values are presented, n = 3). A control with buffer only yielded no inhibition zone
Fig. 4Activities of TFPI-2 C-terminal derived peptides in human plasma. The bactericidal activity of TFPI-2 peptides was assessed in physiological buffer conditions using viable count analysis. a–e Bacteria E. coli ATCC 25922 were grown to mid-logarithmic phase and incubated with varying concentrations of peptides corresponding to sequences found in mammals, birds, reptiles, frog and fish species. Peptides were used in buffer containing 0.15 M NaCl, 10 mM Tris, pH 7.4 alone, or in presence of 20 % human plasma. The antimicrobial activity was determined by plating serial dilution of bacteria on TH agar plates and number of cfu was counted after overnight incubation. All investigated peptides showed dose dependent bactericidal activity and 100 % bacterial killing was achieved in all cases at 1 μM concentration
Fig. 5Anticoagulant effects of TFPI-2 derived peptides. a The activated partial thromboplastin time (aPTT) was determined by addition of buffer or 50 μM of different vertebrate TFPI-2 derived peptides to human plasma. Data are presented as clotting time in seconds; values are mean ± SD (n = 3). b Human erythrocytes were incubated with 60 μM of vertebrate TFPI-2 derived peptides. The hemoglobin release was measured at λ 540 nm and hemolysis was indicated in percentage, Triton X-100 treated sample being used a positive control
Fig. 6Treatment of LPS-induced septic shock mice with a mouse TFPI-2 derived peptide. Septic shock in Balb/c mice was induced by i.p. injection of 10 mg/kg E. coli LPS. Thirty minutes after LPS injection, VKG24 (0.5 mg/mouse or ~25 mg/kg body weight) or PBS was administrated i.p. a Mouse TFPI-2 derived peptide significantly increased survival of mice. Survival of mice was monitored for 7 days (only the first 96 h is shown in the figure). Statistical comparisons of survival curves were performed using the Mantel-Cox’s test. ***P ≤ 0.0003. b Weight was determined daily. c Clotting times of aPTT and PT was measured in citrate plasma 24 h after LPS injection (n = 8). d The indicated cytokines were analyzed in plasma 24 h after LPS injection (n = 8). Statistical analysis for C-D, one-way ANOVA with Tukey’s multiple comparisons post-test was used. **P ≤ 0.003, ****P ≤ 0.0001