Literature DB >> 27346524

Wiring Together Synthetic Bacterial Consortia to Create a Biological Integrated Circuit.

Nicolas Perry1, Edward M Nelson1, Gregory Timp1.   

Abstract

The promise of adapting biology to information processing will not be realized until engineered gene circuits, operating in different cell populations, can be wired together to express a predictable function. Here, elementary biological integrated circuits (BICs), consisting of two sets of transmitter and receiver gene circuit modules with embedded memory placed in separate cell populations, were meticulously assembled using live cell lithography and wired together by the mass transport of quorum-sensing (QS) signal molecules to form two isolated communication links (comlinks). The comlink dynamics were tested by broadcasting "clock" pulses of inducers into the networks and measuring the responses of functionally linked fluorescent reporters, and then modeled through simulations that realistically captured the protein production and molecular transport. These results show that the comlinks were isolated and each mimicked aspects of the synchronous, sequential networks used in digital computing. The observations about the flow conditions, derived from numerical simulations, and the biofilm architectures that foster or silence cell-to-cell communications have implications for everything from decontamination of drinking water to bacterial virulence.

Entities:  

Keywords:  biological computing; cell−cell communication; quorum sensing; synthetic biofilm; synthetic biology

Mesh:

Year:  2016        PMID: 27346524     DOI: 10.1021/acssynbio.6b00002

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  6 in total

Review 1.  Rational engineering of synthetic microbial systems: from single cells to consortia.

Authors:  Philip Bittihn; M Omar Din; Lev S Tsimring; Jeff Hasty
Journal:  Curr Opin Microbiol       Date:  2018-03-22       Impact factor: 7.934

Review 2.  Synthetic biology routes to bio-artificial intelligence.

Authors:  Darren N Nesbeth; Alexey Zaikin; Yasushi Saka; M Carmen Romano; Claudiu V Giuraniuc; Oleg Kanakov; Tetyana Laptyeva
Journal:  Essays Biochem       Date:  2016-11-30       Impact factor: 8.000

3.  Characterizing chemical signaling between engineered "microbial sentinels" in porous microplates.

Authors:  Christopher A Vaiana; Hyungseok Kim; Jonathan Cottet; Keiko Oai; Zhifei Ge; Kameron Conforti; Andrew M King; Adam J Meyer; Haorong Chen; Christopher A Voigt; Cullen R Buie
Journal:  Mol Syst Biol       Date:  2022-03       Impact factor: 11.429

4.  Dynamic cybergenetic control of bacterial co-culture composition via optogenetic feedback.

Authors:  Joaquín Gutiérrez Mena; Sant Kumar; Mustafa Khammash
Journal:  Nat Commun       Date:  2022-08-16       Impact factor: 17.694

5.  Majority sensing in synthetic microbial consortia.

Authors:  Razan N Alnahhas; Mehdi Sadeghpour; Ye Chen; Alexis A Frey; William Ott; Krešimir Josić; Matthew R Bennett
Journal:  Nat Commun       Date:  2020-07-21       Impact factor: 14.919

6.  Tools for engineering coordinated system behaviour in synthetic microbial consortia.

Authors:  Nicolas Kylilis; Zoltan A Tuza; Guy-Bart Stan; Karen M Polizzi
Journal:  Nat Commun       Date:  2018-07-11       Impact factor: 14.919

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.