Literature DB >> 27342747

Intrinsic local destabilization of the C-terminus predisposes integrin α1 I domain to a conformational switch induced by collagen binding.

Ana Monica Nunes1,2, Jie Zhu1,2, Jacqueline Jezioro1,2, Conceição A S A Minetti1, David P Remeta1, Richard W Farndale3, Samir W Hamaia3, Jean Baum1,2.   

Abstract

Integrin-collagen interactions play a critical role in a myriad of cellular functions that include immune response, and cell development and differentiation, yet their mechanism of binding is poorly understood. There is increasing evidence that conformational flexibility assumes a central role in the molecular mechanisms of protein-protein interactions and here we employ NMR hydrogen-deuterium exchange (HDX) experiments to explore the impact of slower timescale dynamic events. To gain insight into the mechanisms underlying collagen-induced conformational switches, we have undertaken a comparative study between the wild type integrin α1 I and a gain-of-function E317A mutant. NMR HDX results suggest a relationship between regions exhibiting a reduced local stability in the unbound I domain and those that undergo significant conformational changes upon binding. Specifically, the αC and α7 helices within the C-terminus are at the center of such major perturbations and present reduced local stabilities in the unbound state relative to other structural elements. Complementary isothermal titration calorimetry experiments have been performed to derive complete thermodynamic binding profiles for association of the collagen-like triple-helical peptide with wild type α1 I and E317A mutant. The differential energetics observed for E317A are consistent with the HDX experiments and support a model in which intrinsically destabilized regions predispose conformational rearrangement in the integrin I domain. This study highlights the importance of exploring different timescales to delineate allosteric and binding events.
© 2016 The Protein Society.

Entities:  

Keywords:  NMR; alpha1 I domain; binding energetics; collagen; conformational switch; dynamics; hydrogen-deuterium exchange; integrin

Mesh:

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Year:  2016        PMID: 27342747      PMCID: PMC5338244          DOI: 10.1002/pro.2972

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  58 in total

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Journal:  J Biol Chem       Date:  2000-02-04       Impact factor: 5.157

2.  Effects of conformational activation of integrin alpha 1I and alpha 2I domains on selective recognition of laminin and collagen subtypes.

Authors:  Mira Tulla; Matti Lahti; J Santeri Puranen; Anna-Maria Brandt; Jarmo Käpylä; Anna Domogatskaya; Tiina A Salminen; Karl Tryggvason; Mark S Johnson; Jyrki Heino
Journal:  Exp Cell Res       Date:  2008-02-09       Impact factor: 3.905

3.  NMR studies demonstrate a unique AAB composition and chain register for a heterotrimeric type IV collagen model peptide containing a natural interruption site.

Authors:  Jianxi Xiao; Xiuxia Sun; Balaraman Madhan; Barbara Brodsky; Jean Baum
Journal:  J Biol Chem       Date:  2015-07-24       Impact factor: 5.157

4.  Local conformation and dynamics of isoleucine in the collagenase cleavage site provide a recognition signal for matrix metalloproteinases.

Authors:  Jianxi Xiao; Rayna M Addabbo; Janelle L Lauer; Gregg B Fields; Jean Baum
Journal:  J Biol Chem       Date:  2010-08-02       Impact factor: 5.157

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Journal:  Adv Exp Med Biol       Date:  2014       Impact factor: 2.622

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7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

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Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

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9.  Structure of the integrin alpha2beta1-binding collagen peptide.

Authors:  Jonas Emsley; C Graham Knight; Richard W Farndale; Michael J Barnes
Journal:  J Mol Biol       Date:  2004-01-23       Impact factor: 5.469

10.  Structural insight on the recognition of surface-bound opsonins by the integrin I domain of complement receptor 3.

Authors:  Goran Bajic; Laure Yatime; Robert B Sim; Thomas Vorup-Jensen; Gregers R Andersen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-24       Impact factor: 11.205

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  3 in total

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Authors:  Zhengli Wang; Aye Myat Myat Thinn; Jieqing Zhu
Journal:  J Biol Chem       Date:  2017-10-27       Impact factor: 5.157

2.  Magnesium Activates Microsecond Dynamics to Regulate Integrin-Collagen Recognition.

Authors:  Ana Monica Nunes; Conceição A S A Minetti; David P Remeta; Jean Baum
Journal:  Structure       Date:  2018-06-21       Impact factor: 5.006

3.  Glycation changes molecular organization and charge distribution in type I collagen fibrils.

Authors:  Sneha Bansode; Uliana Bashtanova; Rui Li; Jonathan Clark; Karin H Müller; Anna Puszkarska; Ieva Goldberga; Holly H Chetwood; David G Reid; Lucy J Colwell; Jeremy N Skepper; Catherine M Shanahan; Georg Schitter; Patrick Mesquida; Melinda J Duer
Journal:  Sci Rep       Date:  2020-02-25       Impact factor: 4.379

  3 in total

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