Literature DB >> 27341139

Thermal stress induces a distinct transcriptome profile in the Pacific oyster Crassostrea gigas.

Hyun-Jeong Lim1, Bo-Mi Kim2, In Joon Hwang1, Jeong-Soo Lee3, Ik-Young Choi4, Youn-Jung Kim5, Jae-Sung Rhee6.   

Abstract

Oysters are frequently subjected to heat stress during tidal emersion/immersion cycles in their habitats due to attachment on the rocky shore. To understand the effect of temperature elevation on the whole transcriptome over time, the Pacific oyster Crassostrea gigas was exposed to seawater temperature 32°C for 72h from the control 20°C. RNA-seq identified differentially expressed stress responsive transcripts upon thermal stress in the gill tissues of C. gigas. The primary effect of heat stress appears to be significantly induced transcription of molecular chaperones, including members of the heat shock protein (hsp) families, while genes typically associated with protein metabolism, such as those involved in protein degradation (e.g. ATP-dependent proteolysis pathway) and biosynthesis (e.g. ribosomal protein genes), were repressed. In particular, several hsp70 isoforms and a small hsp20 maintained prolonged mRNA expressions for 72h. This study provides preliminary insights into the molecular response of C. gigas to heat stress and suggests a basis for future studies examining molecular adaptation or thermotolerance metabolism in the Pacific oyster.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Crassostrea gigas; Oyster; Temperature; Thermal stress; Transcriptome

Mesh:

Substances:

Year:  2016        PMID: 27341139     DOI: 10.1016/j.cbd.2016.06.006

Source DB:  PubMed          Journal:  Comp Biochem Physiol Part D Genomics Proteomics        ISSN: 1744-117X            Impact factor:   2.674


  10 in total

1.  Identification of HSF1 Target Genes Involved in Thermal Stress in the Pacific Oyster Crassostrea gigas by ChIP-seq.

Authors:  Youli Liu; Qihui Zhu; Li Li; Wei Wang; Guofan Zhang
Journal:  Mar Biotechnol (NY)       Date:  2020-01-21       Impact factor: 3.619

2.  Transcriptome profiling suggests roles of innate immunity and digestion metabolism in purplish Washington clam.

Authors:  Bo-Mi Kim; Do-Hwan Ahn; Hyejin Kim; Jung Sick Lee; Jae-Sung Rhee; Hyun Park
Journal:  Genes Genomics       Date:  2018-10-10       Impact factor: 1.839

3.  Transcriptomic Analysis Reveals Insights on Male Infertility in Octopus maya Under Chronic Thermal Stress.

Authors:  Laura López-Galindo; Oscar E Juárez; Ernesto Larios-Soriano; Giulia Del Vecchio; Claudia Ventura-López; Asunción Lago-Lestón; Clara Galindo-Sánchez
Journal:  Front Physiol       Date:  2019-01-15       Impact factor: 4.566

4.  RNAi based transcriptome suggests genes potentially regulated by HSF1 in the Pacific oyster Crassostrea gigas under thermal stress.

Authors:  Youli Liu; Li Li; Baoyu Huang; Wei Wang; Guofan Zhang
Journal:  BMC Genomics       Date:  2019-08-08       Impact factor: 3.969

5.  Metabolic response of Scapharca subcrenata to heat stress using GC/MS-based metabolomics.

Authors:  Yazhou Jiang; Haifeng Jiao; Peng Sun; Fei Yin; Baojun Tang
Journal:  PeerJ       Date:  2020-01-28       Impact factor: 2.984

6.  Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides.

Authors:  Emilie Réalis-Doyelle; Julie Schwartz; Cédric Cabau; Lorane Le Franc; Benoit Bernay; Guillaume Rivière; Christophe Klopp; Pascal Favrel
Journal:  Mar Drugs       Date:  2021-08-07       Impact factor: 5.118

7.  Proteomic response of early juvenile Pacific oysters (Crassostrea gigas) to temperature.

Authors:  Grace Crandall; Rhonda Elliott Thompson; Benoit Eudeline; Brent Vadopalas; Emma Timmins-Schiffman; Steven Roberts
Journal:  PeerJ       Date:  2022-10-14       Impact factor: 3.061

8.  Integrated application of transcriptomics and metabolomics provides insights into glycogen content regulation in the Pacific oyster Crassostrea gigas.

Authors:  Busu Li; Kai Song; Jie Meng; Li Li; Guofan Zhang
Journal:  BMC Genomics       Date:  2017-09-11       Impact factor: 3.969

9.  Regulation Between HSF1 Isoforms and HSPs Contributes to the Variation in Thermal Tolerance Between Two Oyster Congeners.

Authors:  Youli Liu; Li Li; Haigang Qi; Huayong Que; Wei Wang; Guofan Zhang
Journal:  Front Genet       Date:  2020-10-27       Impact factor: 4.599

10.  Genetic Constraints, Transcriptome Plasticity, and the Evolutionary Response to Climate Change.

Authors:  Michael L Logan; Christian L Cox
Journal:  Front Genet       Date:  2020-09-18       Impact factor: 4.599

  10 in total

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