Literature DB >> 27338005

Species-sorting and mass-transfer paradigms control managed natural metacommunities.

Susanne Günther1, Karoline Faust2,3,4, Joachim Schumann1, Hauke Harms1, Jeroen Raes2,3, Susann Müller1.   

Abstract

A complex microbial system consisting of six different interconnected localities was thoroughly investigated at full scale for over a year. The metacommunity concept originating from macro-ecology was used to uncover mechanisms of community assembly by observing microbial interrelationships in and between the different localities via correlation and network analysis. The individual-based observation approach was applied using high-throughput microbial community cytometry in addition to next generation sequencing. We found robust α-diversity values for each of the six localities and high β-diversity values despite directed connectivity between localities, classifying for endpoint assembly of organisms in each locality. Endpoint characteristics were based on subcommunities with high cell numbers whereas those with lower cell numbers were involved in dispersal. Perturbation caused abiotic parameters to alter local community assembly with especially the rare cells announcing community restructuration processes. The mass-effect paradigm as part of the metacommunity concept was identified by an increase in interlocality biotic correlations under perturbation which, however, did not unbalance the predominant species-sorting paradigm in the studied full scale metacommunity. Data as generated in this study might contribute to the development of individual-based models for controlling managed multispecies natural systems in future.
© 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

Mesh:

Year:  2016        PMID: 27338005     DOI: 10.1111/1462-2920.13402

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  13 in total

1.  Characterizing Microbiome Dynamics - Flow Cytometry Based Workflows from Pure Cultures to Natural Communities.

Authors:  Johannes Lambrecht; Florian Schattenberg; Hauke Harms; Susann Mueller
Journal:  J Vis Exp       Date:  2018-07-12       Impact factor: 1.355

2.  Stabilizing microbial communities by looped mass transfer.

Authors:  Shuang Li; Nafi'u Abdulkadir; Florian Schattenberg; Ulisses Nunes da Rocha; Volker Grimm; Susann Müller; Zishu Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-21       Impact factor: 12.779

3.  Ecological Stability Properties of Microbial Communities Assessed by Flow Cytometry.

Authors:  Zishu Liu; Nicolas Cichocki; Fabian Bonk; Susanne Günther; Florian Schattenberg; Hauke Harms; Florian Centler; Susann Müller
Journal:  mSphere       Date:  2018-01-17       Impact factor: 4.389

Review 4.  Microbial ecology-based engineering of Microbial Electrochemical Technologies.

Authors:  Christin Koch; Benjamin Korth; Falk Harnisch
Journal:  Microb Biotechnol       Date:  2017-08-14       Impact factor: 5.813

5.  Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence.

Authors:  Johannes Lambrecht; Nicolas Cichocki; Thomas Hübschmann; Christin Koch; Hauke Harms; Susann Müller
Journal:  Microb Cell Fact       Date:  2017-10-30       Impact factor: 5.328

6.  Dispersal homogenizes communities via immigration even at low rates in a simplified synthetic bacterial metacommunity.

Authors:  Stilianos Fodelianakis; Alexander Lorz; Adriana Valenzuela-Cuevas; Alan Barozzi; Jenny Marie Booth; Daniele Daffonchio
Journal:  Nat Commun       Date:  2019-03-21       Impact factor: 14.919

7.  Deciphering the Assembly Processes of the Key Ecological Assemblages of Microbial Communities in Thirteen Full-Scale Wastewater Treatment Plants.

Authors:  Liyuan Hou; Anyi Hu; Shaohua Chen; Kaisong Zhang; Sandi Orlić; Azhar Rashid; Chang-Ping Yu
Journal:  Microbes Environ       Date:  2019-04-16       Impact factor: 2.912

8.  Mass-immigration determines the assembly of activated sludge microbial communities.

Authors:  Giulia Dottorini; Thomas Yssing Michaelsen; Sergey Kucheryavskiy; Kasper Skytte Andersen; Jannie Munk Kristensen; Miriam Peces; Dorottya Sarolta Wagner; Marta Nierychlo; Per Halkjær Nielsen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-06       Impact factor: 11.205

9.  Phylogenetic clustering of small low nucleic acid-content bacteria across diverse freshwater ecosystems.

Authors:  Caitlin R Proctor; Michael D Besmer; Timon Langenegger; Karin Beck; Jean-Claude Walser; Martin Ackermann; Helmut Bürgmann; Frederik Hammes
Journal:  ISME J       Date:  2018-02-07       Impact factor: 10.302

10.  Dormancy dynamics and dispersal contribute to soil microbiome resilience.

Authors:  Jackson W Sorensen; Ashley Shade
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-03-23       Impact factor: 6.237

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.