Literature DB >> 27337207

Metabolic diversity and adaptive mechanisms of iron- and/or sulfur-oxidizing autotrophic acidophiles in extremely acidic environments.

Xian Zhang1,2, Xueduan Liu1,2, Yili Liang1,2, Fenliang Fan3, Xiaoxia Zhang4,5, Huaqun Yin1,2.   

Abstract

Many studies have investigated the mechanisms underlying the survival and growth of certain organisms in extremely acidic environments known to be harmful to most prokaryotes and eukaryotes. Acidithiobacillus and Leptospirillum spp. are dominant bioleaching bacteria widely used in bioleaching systems, which are characterized by extremely acidic environments. To survive and grow in such settings, these acidophiles utilize shared molecular mechanisms that allow life in extreme conditions. In this review, we have summarized the results of published genomic analyses, which underscore the ability of iron- and/or sulfur-oxidizing autotrophic acidophiles belonging to the genera Acidithiobacillus and Leptospirillum to adapt to acidic environmental conditions. Several lines of evidence point at the metabolic diversity and multiplicity of pathways involved in the survival of these organisms. The ability to thrive in adverse environments requires versatile activation of structural and functional adaptive responses, including bacterial adhesion, motility, and resistance to heavy metals. We have highlighted recent developments centered on the key survival mechanisms employed by dominant extremophiles, and have laid the foundation for future studies focused on the ability of acidophiles to thrive in extremely acidic environments.
© 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

Entities:  

Year:  2016        PMID: 27337207     DOI: 10.1111/1758-2229.12435

Source DB:  PubMed          Journal:  Environ Microbiol Rep        ISSN: 1758-2229            Impact factor:   3.541


  17 in total

1.  Genome Mining and Predictive Functional Profiling of Acidophilic Rhizobacterium Pseudomonas fluorescens Pt14.

Authors:  Pooja Rani; Nitish Kumar Mahato; Anukriti Sharma; Desiraju Lakshmi Narsimha Rao; Komal Kamra; Rup Lal
Journal:  Indian J Microbiol       Date:  2017-04-18       Impact factor: 2.461

2.  Adaptive mechanism of Acidithiobacillus thiooxidans CCTCC M 2012104 under stress during bioleaching of low-grade chalcopyrite based on physiological and comparative transcriptomic analysis.

Authors:  Zongwei Yin; Shoushuai Feng; Yanjun Tong; Hailin Yang
Journal:  J Ind Microbiol Biotechnol       Date:  2019-08-16       Impact factor: 3.346

3.  Adaptive Evolution of Extreme Acidophile Sulfobacillus thermosulfidooxidans Potentially Driven by Horizontal Gene Transfer and Gene Loss.

Authors:  Xian Zhang; Xueduan Liu; Yili Liang; Xue Guo; Yunhua Xiao; Liyuan Ma; Bo Miao; Hongwei Liu; Deliang Peng; Wenkun Huang; Yuguang Zhang; Huaqun Yin
Journal:  Appl Environ Microbiol       Date:  2017-03-17       Impact factor: 4.792

4.  Metabolic transcriptional analysis on copper tolerance in moderate thermophilic bioleaching microorganism Acidithiobacillus caldus.

Authors:  Shoushuai Feng; Shaoxiang Hou; Yaquan Cui; Yanjun Tong; Hailin Yang
Journal:  J Ind Microbiol Biotechnol       Date:  2019-11-22       Impact factor: 3.346

5.  Gene Turnover Contributes to the Evolutionary Adaptation of Acidithiobacillus caldus: Insights from Comparative Genomics.

Authors:  Xian Zhang; Xueduan Liu; Qiang He; Weiling Dong; Xiaoxia Zhang; Fenliang Fan; Deliang Peng; Wenkun Huang; Huaqun Yin
Journal:  Front Microbiol       Date:  2016-12-06       Impact factor: 5.640

Review 6.  In a quest for engineering acidophiles for biomining applications: challenges and opportunities.

Authors:  Yosephine Gumulya; Naomi J Boxall; Himel N Khaleque; Ville Santala; Ross P Carlson; Anna H Kaksonen
Journal:  Genes (Basel)       Date:  2018-02-21       Impact factor: 4.096

7.  Comparative Genomics Unravels the Functional Roles of Co-occurring Acidophilic Bacteria in Bioleaching Heaps.

Authors:  Xian Zhang; Xueduan Liu; Yili Liang; Yunhua Xiao; Liyuan Ma; Xue Guo; Bo Miao; Hongwei Liu; Deliang Peng; Wenkun Huang; Huaqun Yin
Journal:  Front Microbiol       Date:  2017-05-05       Impact factor: 5.640

Review 8.  Extremophilic Microfactories: Applications in Metal and Radionuclide Bioremediation.

Authors:  Catarina R Marques
Journal:  Front Microbiol       Date:  2018-06-01       Impact factor: 5.640

9.  Comparative Genomics of the Extreme Acidophile Acidithiobacillus thiooxidans Reveals Intraspecific Divergence and Niche Adaptation.

Authors:  Xian Zhang; Xue Feng; Jiemeng Tao; Liyuan Ma; Yunhua Xiao; Yili Liang; Xueduan Liu; Huaqun Yin
Journal:  Int J Mol Sci       Date:  2016-08-19       Impact factor: 5.923

10.  Pan-Genome Analysis Links the Hereditary Variation of Leptospirillum ferriphilum With Its Evolutionary Adaptation.

Authors:  Xian Zhang; Xueduan Liu; Fei Yang; Lv Chen
Journal:  Front Microbiol       Date:  2018-03-27       Impact factor: 5.640

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