Literature DB >> 27332122

Studies on the X-Ray and Solution Structure of FeoB from Escherichia coli BL21.

Gregor Hagelueken1, Jan Hoffmann2, Erik Schubert3, Fraser G Duthie3, Nicole Florin3, Lisa Konrad3, Diana Imhof4, Elmar Behrmann5, Nina Morgner2, Olav Schiemann3.   

Abstract

The ferrous iron transporter FeoB is an important factor in the iron metabolism of many bacteria. Although several structural studies have been performed on its cytosolic GTPase domain (NFeoB), the full-length structure of FeoB remains elusive. Based on a crystal packing analysis that was performed on crystals of NFeoB, a trimeric structure of the FeoB channel was proposed, where the transport pore runs along the trimer axis. Because this trimer has not been observed in some subsequently solved structures of NFeoB homologs, it remains unclear whether or not the trimer is indeed functionally relevant. Here, pulsed electron-electron double resonance spectroscopy, negative stain electron microscopy, and native mass spectrometry are used to analyze the oligomeric state of different soluble and full-length FeoB constructs. The results show that the full-length protein is predominantly monomeric, whereas dimers and trimers are formed to a small percentage. Furthermore, the solution structure of the switch I region is analyzed by pulsed electron-electron double resonance spectroscopy and a new, to our knowledge, crystal structure of NFeoB from Escherichia coli BL21 is presented.
Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27332122      PMCID: PMC4919421          DOI: 10.1016/j.bpj.2016.05.018

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

1.  A suite of Switch I and Switch II mutant structures from the G-protein domain of FeoB.

Authors:  Miriam Rose Ash; Megan J Maher; J Mitchell Guss; Mika Jormakka
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-10-19

2.  Structure and function of the FeoB G-domain from Methanococcus jannaschii.

Authors:  Stefan Köster; Mark Wehner; Christian Herrmann; Werner Kühlbrandt; Ozkan Yildiz
Journal:  J Mol Biol       Date:  2009-07-15       Impact factor: 5.469

3.  CTER-rapid estimation of CTF parameters with error assessment.

Authors:  Pawel A Penczek; Jia Fang; Xueming Li; Yifan Cheng; Justus Loerke; Christian M T Spahn
Journal:  Ultramicroscopy       Date:  2014-02-07       Impact factor: 2.689

4.  Genetic Incorporation of the Unnatural Amino Acid p-Acetyl Phenylalanine into Proteins for Site-Directed Spin Labeling.

Authors:  Eric G B Evans; Glenn L Millhauser
Journal:  Methods Enzymol       Date:  2015-07-02       Impact factor: 1.600

5.  mtsslSuite: Probing Biomolecular Conformation by Spin-Labeling Studies.

Authors:  Gregor Hagelueken; Dinar Abdullin; Olav Schiemann
Journal:  Methods Enzymol       Date:  2015-08-21       Impact factor: 1.600

6.  Structure of an atypical FeoB G-domain reveals a putative domain-swapped dimer.

Authors:  Chandrika N Deshpande; Aaron P McGrath; Josep Font; Amy P Guilfoyle; Megan J Maher; Mika Jormakka
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-03-29

7.  Potassium-activated GTPase reaction in the G Protein-coupled ferrous iron transporter B.

Authors:  Miriam-Rose Ash; Amy Guilfoyle; Ronald J Clarke; J Mitchell Guss; Megan J Maher; Mika Jormakka
Journal:  J Biol Chem       Date:  2010-03-10       Impact factor: 5.157

8.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

9.  RosettaEPR: rotamer library for spin label structure and dynamics.

Authors:  Nathan S Alexander; Richard A Stein; Hanane A Koteiche; Kristian W Kaufmann; Hassane S McHaourab; Jens Meiler
Journal:  PLoS One       Date:  2013-09-05       Impact factor: 3.240

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  5 in total

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Authors:  Gabriel Soares Guerra; Andrea Balan
Journal:  Braz J Microbiol       Date:  2020-08-28       Impact factor: 2.476

2.  PELDOR/DEER: An Electron Paramagnetic Resonance Method to Study Membrane Proteins in Lipid Bilayers.

Authors:  Martin F Peter; Kiran Bountra; Konstantinos Beis; Gregor Hagelueken
Journal:  Methods Mol Biol       Date:  2020

3.  A general protocol for the expression and purification of the intact transmembrane transporter FeoB.

Authors:  Alex E Sestok; Sean M O'Sullivan; Aaron T Smith
Journal:  Biochim Biophys Acta Biomembr       Date:  2022-05-27       Impact factor: 4.019

Review 4.  Why Nature Chose Potassium.

Authors:  Antoine Danchin; Pablo Iván Nikel
Journal:  J Mol Evol       Date:  2019-10-28       Impact factor: 2.395

5.  The contribution of modern EPR to structural biology.

Authors:  Gunnar Jeschke
Journal:  Emerg Top Life Sci       Date:  2018-04-20
  5 in total

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