Literature DB >> 27324307

The canine era: the rise of a biomedical model.

F G van Steenbeek1, M K Hytönen2, P A J Leegwater3, H Lohi2.   

Abstract

Since the annotation of its genome a decade ago, the dog has proven to be an excellent model for the study of inherited diseases. A large variety of spontaneous simple and complex phenotypes occur in dogs, providing physiologically relevant models to corresponding human conditions. In addition, gene discovery is facilitated in clinically less heterogeneous purebred dogs with closed population structures because smaller study cohorts and fewer markers are often sufficient to expose causal variants. Here, we review the development of genomic resources from microsatellites to whole-genome sequencing and give examples of successful findings that have followed the technological progress. The increasing amount of whole-genome sequence data warrants better functional annotation of the canine genome to more effectively utilise this unique model to understand genetic contributions in morphological, behavioural and other complex traits.
© 2016 Stichting International Foundation for Animal Genetics.

Entities:  

Keywords:  animal model; dog; genetic tools; next generation sequencing

Mesh:

Year:  2016        PMID: 27324307     DOI: 10.1111/age.12460

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  22 in total

Review 1.  Stem cells on regenerative and reproductive science in domestic animals.

Authors:  Naira Caroline Godoy Pieri; Aline Fernanda de Souza; Ramon Cesar Botigelli; Lucas Simões Machado; Carlos Eduardo Ambrosio; Daniele Dos Santos Martins; André Furugen Cesar de Andrade; Flavio Vieira Meirelles; Poul Hyttel; Fabiana Fernandes Bressan
Journal:  Vet Res Commun       Date:  2019-01-17       Impact factor: 2.459

2.  Reconstructing the history of founder events using genome-wide patterns of allele sharing across individuals.

Authors:  Rémi Tournebize; Gillian Chu; Priya Moorjani
Journal:  PLoS Genet       Date:  2022-06-23       Impact factor: 6.020

Review 3.  Genetic Basis of Dilated Cardiomyopathy in Dogs and Its Potential as a Bidirectional Model.

Authors:  Karen R Gaar-Humphreys; Talitha C F Spanjersberg; Giorgia Santarelli; Guy C M Grinwis; Viktor Szatmári; Bernard A J Roelen; Aryan Vink; J Peter van Tintelen; Folkert W Asselbergs; Hille Fieten; Magdalena Harakalova; Frank G van Steenbeek
Journal:  Animals (Basel)       Date:  2022-06-29       Impact factor: 3.231

4.  Aberrant hepatic lipid storage and metabolism in canine portosystemic shunts.

Authors:  Lindsay Van den Bossche; Vivien A C Schoonenberg; Iwan A Burgener; Louis C Penning; Ingrid M Schrall; Hedwig S Kruitwagen; Monique E van Wolferen; Guy C M Grinwis; Anne Kummeling; Jan Rothuizen; Jeroen F van Velzen; Nikolas Stathonikos; Martijn R Molenaar; Bernd J Helms; Jos F H M Brouwers; Bart Spee; Frank G van Steenbeek
Journal:  PLoS One       Date:  2017-10-19       Impact factor: 3.240

5.  Gene expression patterns in the progression of canine copper-associated chronic hepatitis.

Authors:  Karen Dirksen; Bart Spee; Louis C Penning; Ted S G A M van den Ingh; Iwan A Burgener; Adrian L Watson; Marian Groot Koerkamp; Jan Rothuizen; Frank G van Steenbeek; Hille Fieten
Journal:  PLoS One       Date:  2017-05-01       Impact factor: 3.240

6.  Canine models of human rare disorders.

Authors:  Marjo K Hytönen; Hannes Lohi
Journal:  Rare Dis       Date:  2016-09-28

7.  Frequency and distribution of 152 genetic disease variants in over 100,000 mixed breed and purebred dogs.

Authors:  Jonas Donner; Heidi Anderson; Stephen Davison; Angela M Hughes; Julia Bouirmane; Johan Lindqvist; Katherine M Lytle; Balasubramanian Ganesan; Claudia Ottka; Päivi Ruotanen; Maria Kaukonen; Oliver P Forman; Neale Fretwell; Cynthia A Cole; Hannes Lohi
Journal:  PLoS Genet       Date:  2018-04-30       Impact factor: 5.917

8.  Assembly and Analysis of Unmapped Genome Sequence Reads Reveal Novel Sequence and Variation in Dogs.

Authors:  Lindsay A Holden; Meharji Arumilli; Marjo K Hytönen; Sruthi Hundi; Jarkko Salojärvi; Kim H Brown; Hannes Lohi
Journal:  Sci Rep       Date:  2018-07-18       Impact factor: 4.379

9.  Urban environment predisposes dogs and their owners to allergic symptoms.

Authors:  Emma Hakanen; Jenni Lehtimäki; Elina Salmela; Katriina Tiira; Johanna Anturaniemi; Anna Hielm-Björkman; Lasse Ruokolainen; Hannes Lohi
Journal:  Sci Rep       Date:  2018-01-25       Impact factor: 4.379

Review 10.  Resilience and Adaptation: Yukon River Watershed Contaminant Risk Indicators.

Authors:  Lawrence Duffy; La'Ona De Wilde; Katie Spellman; Kriya Dunlap; Bonita Dainowski; Susan McCullough; Bret Luick; Mary van Muelken
Journal:  Scientifica (Cairo)       Date:  2018-10-01
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