Literature DB >> 27323069

Genome-wide analysis of TCP family in tobacco.

L Chen1,2, Y Q Chen3, A M Ding1, H Chen1,2, F Xia1,2, W F Wang1,2, Y H Sun1.   

Abstract

The TCP family is a transcription factor family, members of which are extensively involved in plant growth and development as well as in signal transduction in the response against many physiological and biochemical stimuli. In the present study, 61 TCP genes were identified in tobacco (Nicotiana tabacum) genome. Bioinformatic methods were employed for predicting and analyzing the gene structure, gene expression, phylogenetic analysis, and conserved domains of TCP proteins in tobacco. The 61 NtTCP genes were divided into three diverse groups, based on the division of TCP genes in tomato and Arabidopsis, and the results of the conserved domain and sequence analyses further confirmed the classification of the NtTCP genes. The expression pattern of NtTCP also demonstrated that majority of these genes play important roles in all the tissues, while some special genes exercise their functions only in specific tissues. In brief, the comprehensive and thorough study of the TCP family in other plants provides sufficient resources for studying the structure and functions of TCPs in tobacco.

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Year:  2016        PMID: 27323069     DOI: 10.4238/gmr.15027728

Source DB:  PubMed          Journal:  Genet Mol Res        ISSN: 1676-5680


  8 in total

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2.  Genome-Wide Identification of TCP Family Transcription Factors in Medicago truncatula Reveals Significant Roles of miR319-Targeted TCPs in Nodule Development.

Authors:  Hongfeng Wang; Hongwei Wang; Rong Liu; Yiteng Xu; Zhichao Lu; Chuanen Zhou
Journal:  Front Plant Sci       Date:  2018-06-11       Impact factor: 5.753

3.  Evolution and expression of genes encoding TCP transcription factors in Solanum tuberosum reveal the involvement of StTCP23 in plant defence.

Authors:  Sarina Bao; Zhenxin Zhang; Qun Lian; Qinghua Sun; Ruofang Zhang
Journal:  BMC Genet       Date:  2019-12-04       Impact factor: 2.797

4.  Genome-Wide Identification and Characterization of the TCP Gene Family in Cucumber (Cucumis sativus L.) and Their Transcriptional Responses to Different Treatments.

Authors:  Haifan Wen; Yue Chen; Hui Du; Leyu Zhang; Keyan Zhang; Huanle He; Junsong Pan; Run Cai; Gang Wang
Journal:  Genes (Basel)       Date:  2020-11-20       Impact factor: 4.096

5.  Genome-Wide Analysis of the TCP Gene Family and Their Expression Pattern Analysis in Tea Plant (Camellia sinensis).

Authors:  Xiaowen Shang; Zhaolan Han; Dayan Zhang; Ya Wang; Hao Qin; Zhongwei Zou; Lin Zhou; Xujun Zhu; Wanping Fang; Yuanchun Ma
Journal:  Front Plant Sci       Date:  2022-07-01       Impact factor: 6.627

6.  Beyond Destabilizing Activity of SAP11-like Effector of Candidatus Phytoplasma mali Strain PM19.

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Journal:  Microorganisms       Date:  2022-07-12

7.  Analysis of Evolution, Expression and Genetic Transformation of TCP Transcription Factors in Blueberry Reveal That VcTCP18 Negatively Regulates the Release of Flower Bud Dormancy.

Authors:  Yongqiang Li; Shuang An; Qiangqiang Cheng; Yu Zong; Wenrong Chen; Weidong Guo; Lu Zhang
Journal:  Front Plant Sci       Date:  2021-07-09       Impact factor: 5.753

8.  Phylogeny and expression pattern analysis of TCP transcription factors in cassava seedlings exposed to cold and/or drought stress.

Authors:  Ning Lei; Xiang Yu; Shuxia Li; Changying Zeng; Liangping Zou; Wenbin Liao; Ming Peng
Journal:  Sci Rep       Date:  2017-08-30       Impact factor: 4.379

  8 in total

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