| Literature DB >> 27308198 |
Barbara Pokorny1, Paul Kosma1.
Abstract
The ketosidic linkage of 3-deoxy-d-manno-octulosonic acid (Kdo) to lipid A constitutes a general structural feature of the bacterial lipopolysaccharide core. Glycosylation reactions of Kdo donors, however, are challenging due to the absence of a directing group at C-3 and elimination reactions resulting in low yields and anomeric selectivities of the glycosides. While 3-iodo-Kdo fluoride donors showed excellent glycosyl donor properties for the assembly of Kdo oligomers, glycosylation of N-acetyl-glucosamine derivatives was not straightforward. Specifically, oxazoline formation of a β-anomeric methyl glycoside, as well as iodonium ion transfer to an allylic aglycon was found. In addition, dehalogenation of the directing group by hydrogen atom transfer proved to be incompatible with free hydroxyl groups next to benzyl groups. In contrast, glycosylation of a suitably protected methyl 2-acetamido-2-deoxy-α-d-glucopyranoside derivative and subsequent deiodination proceeded in excellent yields and α-specificity, and allowed for subsequent 4-O-phosphorylation. This way, the disaccharides α-Kdo-(2→6)-α-GlcNAcOMe and α-Kdo-(2→6)-α-GlcNAcOMe-4-phosphate were obtained in good overall yields.Entities:
Keywords: Kdo; glycosylation; hydrogen transfer; iodonium; lipopolysaccharide
Year: 2015 PMID: 27308198 PMCID: PMC4906502 DOI: 10.1002/open.201500126
Source DB: PubMed Journal: ChemistryOpen ISSN: 2191-1363 Impact factor: 2.911
Scheme 1Reagents and conditions: a) BF3⋅Et2O, 3 Å molecular sieves, CH2Cl2, 0 °C→rt, 1.5 h, 3: 32 %, 4: 11 %, 5: 3 %.
Scheme 2Crossover experiments of intermediary iodonium ion in the presence of different olefins and ratios of obtained product mixtures.
Scheme 3Reagents and conditions: a) 1, BF3⋅Et2O, 3 Å molecular sieves, CH2Cl2, 0 °C→rt, 1 h, 55 %; b) Ac2O, 4‐(N,N‐dimethylamino)pyridine, pyridine, rt, 5 h, 59 %; c) lauroyl peroxide, cyclohexane/1,2‐dichloroethane (8:1), reflux, 2 h, 75 %.
Figure 1Evidence for the presence of two rotamers in disaccharide 13; top: 1D NOE‐difference spectrum after selective pulse at 5.64 ppm (NH signal of minor compound); bottom: expansion plot of 1H NMR of 13 showing the NH signals.
Scheme 4Reagents and conditions: a) 1, BF3⋅Et2O, 3 Å molecular sieves, CH2Cl2, 0 °C→rt, 1 h, 89 %; b) lauroyl peroxide, cyclohexane/1,2‐dichloroethane (8:1), reflux, 2 h, 87 %; c) Pd/C (10 %), H2, MeOH, rt., 3 h, 96 %; d) dibenzyl N,N‐diisopropylphosphoramidite, 1H‐tetrazole, 4 Å molecular sieves, CH2Cl2, 0 °C, 70 min, then mCPBA, 0 °C, 1 h, 70 %; e) NaOMe, MeOH, 3 h, then aq. NaOH, 0 °C, 5 h, 97 %; f) Pd/C (10 %), H2, MeOH, rt, 30 min, then NaOMe, MeOH, rt, 17 h, then aq NaOH, 0 °C, 5 h, 99 %.