Literature DB >> 27308023

Crystal structures of 4-methyl-2-oxo-2H-chromene-7,8-diyl di-acetate and 4-methyl-2-oxo-2H-chromene-7,8-diyl bis-(pent-4-ynoate).

Akintunde Akinyemi1, Courtney Thomas1, Willis Marsh1, Ray J Butcher1, Jerry P Jasinski2, Lystranne A Maynard-Smith1.   

Abstract

In the structures of the two title coumarin derivatives, C14H12O6, (1), and C20H16O6, (2), one with acetate and the other with pent-4-ynoate substituents, both the coumarin rings are almost planar. In (1), both acetate substituents are significantly rotated out of the coumarin plane to minimize steric repulsions. One acetate substituent is disordered over two equivalent conformations, with occupancies of 0.755 (17) and 0.245 (17). In (2), there are two pent-4-ynoate substituents, the C C group of one being disordered over two positions with occupancies of 0.55 (2) and 0.45 (2). One of the pent-4-ynoate substituents is in an extended conformation, while the other is in a bent conformation. In this derivative, the planar part of both pent-4-ynoate substituents deviate from the coumarin plane. The packing of (1) is dominated by π-π stacking involving the coumarin rings and weak C-H⋯O contacts link the parallel stacks in the [101] direction. In contrast, in (2) the packing is dominated by R 2 (2)(24) hydrogen bonds, involving the acidic sp H atom and the oxo O atom, which link the mol-ecules into centrosymmetric dimers. The bent conformation of one of the pent-4-ynoate substituents prevents the coumarin rings from engaging in π-π stacking.

Entities:  

Keywords:  acetate substituent; coumarin; crystal structure; pent-4-ynoate substituent

Year:  2016        PMID: 27308023      PMCID: PMC4908516          DOI: 10.1107/S2056989016005892

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Coumarins and their derivatives have wide applications in a number of diverse areas. They are used in the pharmaceutical industry as precursor reagents in the synthesis of a number of synthetic anti­coagulant pharmaceuticals (Bairagi et al., 2012 ▸), the most notable being warfarin (Holbrook et al., 2005 ▸). Modified coumarins are a type of vitamin K antagonist (Marongiu & Barcellona, 2015 ▸). In another important application, coumarin dyes are extensively used as gain media in blue–green tunable organic dye lasers (Schäfer, 1990 ▸; Duarte & Hillman, 1990 ▸; Duarte, 2003 ▸). Coumarin tetra­methyl laser dyes offer wide tunability and high laser gain (Chen et al., 1988 ▸; Duarte et al., 2006 ▸), and they are also used as the active medium in coherent OLED emitters (Duarte et al., 2005 ▸). 4-Methyl coumarin derivatives have previously been used as acetyl-group donors for post-translational modification of proteins via an acet­yl–CoA independent mechanism (Raj, Singh et al., 2005 ▸; Raj, Kumari et al., 2006 ▸). Calreticulin-mediated acetyl­ation of gluta­thione-S-transferase (GST) using substrate 7,8-diacety­oxy-4-methyl coumarin, DAMC (1) (systematic name: 4-methyl-2-oxo-2H-chromene-7,8-diyl di­acetate) has been shown to inhibit GST activity in a spectroscopic assay (Raj, Singh et al., 2005 ▸). The crystal structure of the related compound 7,8-dihy­droxy-4-methyl­coumarin (Kurosaki et al., 2003 ▸) has been reported. Pentynoyl probes have been used as chemical reporters to monitor protein acetyl­ation (Bateman et al., 2013 ▸; Yang et al., 2010 ▸). For background to bio-orthogonal reactions using alkyne–azide cyclo­addition, see Sletten & Bertozzi (2011 ▸) and Yang & Hang (2011 ▸). We have synthesized a new coumarin derivative, 7,8-dipentyno­yloxy-4-methyl coumarin, DPeMC (2) [systematic name: 4-methyl-2-oxo-2H chromene-7,8-diyl bis­(pent-4-ynoate)] as a chemical reporter of calreticulin’s acyl­transferase capabilities (Singh et al., 2011 ▸). As part of this work, the crystal structures of both coumarin derivatives are presented in this article.

Structural commentary

This paper reports the structures of two derivatives of coumarin (systematic name; 2H-chromen-2-one), C14H12O6 (1) and C20H16O6 (2), which are to be used as chemical reporters of calreticulin’s acyl­transferase capabilities. These two compounds will be first discussed individually and then compared. In the structure of (1) (Fig. 1 ▸), the coumarin ring is almost planar (r.m.s. deviation of fitted atoms = 0.0063 Å) with O2 in the plane [deviation of 0.0048 (9) Å]. Both acetate substituents are significantly rotated out of this plane to minimize steric repulsions [dihedral angle of 66.19 (7)° to the coumarin ring for O3, O4, and C11, and 79.4 (3)° for O5, C13 O6A]. One acetate substituent is disordered over two equivalent conformations with occupancies of 0.755 (17) and 0.245 (17). The metrical parameters of both the coumarin ring and acetate substituents are in the normal ranges.
Figure 1

Diagram of the structure and numbering scheme for (1), showing the major occupancy component only. Atomic displacement parameters are drawn at the 30% probability level.

In (2) (Fig. 2 ▸), the C≡C group of one of the pent-4-ynoate substituents is disordered over two positions with occupancies of 0.55 (2) and 0.45 (2). The coumarin ring is almost planar (r.m.s. deviation of fitted atoms = 0.0305 Å) with O2 significantly out of this plane [0.144 (2) Å] but O3 in the plane [0.063 (2) Å]. One of the pent-4-ynoate substituents is in an extended conformation (O5 to C21) while the other is in a bent conformation about C13. This can be seen from a consideration of the O3—C12—C13—C14 torsion angle of −46.3 (2)° compared to the equivalent torsion angle O5—C17C18—C19 of 176.16 (12)°. The planar parts of both pent-4-ynoate substituents deviate from the coumarin plane but by different amounts [40.90 (15)° for O3, O4 and C12 compared to 74.07 (10)° for O5, O6 and C17]. The metrical parameters of both the coumarin ring and pent-4-ynoate substituents are in the normal ranges including the C≡C triple bonds [C15A≡C16A = 1.186 (9), C15B≡C16B = 1.169 (11) and C20≡C21 = 1.177 (3) Å].
Figure 2

Diagram of the structure and numbering scheme for (2), showing the major occupancy component only. Atomic displacement parameters are drawn at the 30% probability level.

Supra­molecular features

The packing of (1) is dominated by π–π stacking involving the coumarin rings [centroid–centroid distance of 3.6640 (5) Å, slippage of 1.422 Å, symmetry code 1 − x, 1 − y, 1 − z]. This can be observed in Fig. 3 ▸. In addition, there are weak C—H⋯O contacts (Table 1 ▸) involving C13 and O6A(x, 1 + y, z) as well as C6 and O2(x − 1, 1 + y, z), C15A and O2 (1 − x, −y, 2 − z) which link the parallel stacks in the [101] direction.
Figure 3

Packing diagram for (1), viewed along the c axis, showing the parallel coumarin rings. C—H⋯O secondary inter­actions are drawn with dashed lines.

Table 1

Hydrogen-bond geometry (Å, °) for (1)

D—H⋯A D—HH⋯A DA D—H⋯A
C6—H6A⋯O2i 0.952.653.3465 (17)130
C13—H13A⋯O6A ii 0.982.483.451 (5)173
C15A—H15B⋯O2iii 0.982.523.401 (8)150

Symmetry codes: (i) ; (ii) ; (iii) .

In contrast to (1), for (2) the packing (Fig. 4 ▸) is dominated by (24) hydrogen bonds (Table 2 ▸) involving the acidic sp H atom and O2 which link the mol­ecules into centrosymmetric dimers. The bent conformation of one of the pent-4-ynoate substituents prevents the coumarin rings from engaging in π–π stacking in contrast to (1).
Figure 4

Packing diagram for (2), viewed along the a axis. (24) hydrogen bonds involving the acidic sp H and O2 atoms link the mol­ecules into centrosymmetric dimers. C—H⋯O secondary inter­actions are drawn with dashed lines.

Table 2

Hydrogen-bond geometry (Å, °) for (2)

D—H⋯A D—HH⋯A DA D—H⋯A
C13—H13B⋯O4i 0.992.433.244 (2)139
C18—H18A⋯O6i 0.992.513.482 (2)167

Symmetry code: (i) .

Database survey

Our group has reported a number of related structures (Jasinski & Paight, 1994 ▸, 1995 ▸; Jasinski & Woudenberg, 1994 ▸, 1995 ▸; Jasinski & Li, 2002 ▸; Jasinski et al., 1998 ▸, 2003 ▸; Butcher et al., 2007 ▸).

Synthesis and crystallization

7,8-Diacet­oxy-4-methyl­coumarin (1). 4-Methyl-2-oxo-2H-chromene-7,8-diyl di­acetate (DAMC) was synthesized using a previously reported procedure (Jalal et al., 2012 ▸). 7,8-Dipentyno­yloxy-4-methyl­coumarin (2). 0.5 mmol 7,8-dihy­droxy-4-methyl coumarin, DHMC [systematic name: 7,8-dihy­droxy-4-methyl-2H-chromen-2-one], 2.5 equivalents pentynoic anhydride (Malkoch et al., 2005 ▸) and catalytic 4-di­methyl­amino­pyridine (DMAP) was stirred for 24 h at room temperature in anhydrous THF (2 mL). Ice-cold water (25 mL) was added to the reaction flask, and the filtered crude product was washed with hexa­nes followed by recrystallization from ethanol to obtain small brown crystals of 4-methyl-2-oxo-2H chromene-7,8-diyl bis­(pent-4-ynoate). Spectroscopic analysis: 1H NMR (400 MHz, CDCl3): δ 7.51–7.49 (1H, d), δ 7.20–7.17 (1H, d), δ 6.29 (1H, s), δ 3.01–3.08 (2H, m, HC≡C), δ 2.89–2.84 (2H, t, C≡C—CH2), δ 2.61–2.70 (4H, m, OOC—CH2), δ 2.44 (3H, s, CH3), δ 2.09–2.11 (2H, C≡C-–CH2).

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. For (1), the H atoms were positioned geometrically and refined as riding: C—H = 0.95–0.98 Å with U(H) = 1.5U eq(C) for methyl H atoms and = 1.2U(C) for other H atoms. One acetate substituent is disordered over two equivalent conformations with occupancies of 0.755 (17) and 0.245 (17).
Table 3

Experimental details

 (1)(2)
Crystal data
Chemical formulaC14H12O6 C20H16O6
M r 276.24352.33
Crystal system, space groupTriclinic, P Monoclinic, P21/n
Temperature (K)173200
a, b, c (Å)7.3722 (10), 8.7235 (7), 11.7032 (15)5.2785 (3), 16.3785 (8), 20.0502 (11)
α, β, γ (°)69.263 (10), 87.519 (11), 69.113 (10)90, 95.992 (2), 90
V3)654.66 (14)1723.95 (16)
Z 24
Radiation typeMo KαMo Kα
μ (mm−1)0.110.10
Crystal size (mm)0.33 × 0.26 × 0.110.55 × 0.14 × 0.11
 
Data collection
DiffractometerAgilent Xcalibur Eos GeminiBruker Quest
Absorption correctionMulti-scan (CrysAlis PRO; Agilent, 2014)Multi-scan (SADABS; Sheldrick, 1996)
T min, T max 0.883, 1.0000.658, 0.746
No. of measured, independent and observed [I > 2σ(I)] reflections7360, 4296, 308724358, 5276, 3859
R int 0.0360.035
(sin θ/λ)max−1)0.7590.716
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.055, 0.156, 1.040.057, 0.142, 1.07
No. of reflections42965276
No. of parameters192255
No. of restraints1313
H-atom treatmentH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.36, −0.240.37, −0.21

Computer programs: CrysAlis PRO (Agilent, 2014 ▸), APEX2 (Bruker, 2005 ▸), SAINT (Bruker, 2002 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2014 (Sheldrick, 2015b ▸) and SHELXTL (Sheldrick, 2008 ▸).

In the refinement for (2), the H atoms were positioned geometrically and refined as riding: C—H = 0.95–0.99 Å with U iso(H) = 1.5U eq(C) for methyl H atoms and = 1.2U(C) for other H atoms. The C≡C group of one of the pent-4-ynoate substituents is disordered over two positions with occupancies of 0.55 (2) and 0.45 (2). Crystal structure: contains datablock(s) 1, 2. DOI: 10.1107/S2056989016005892/hg5471sup1.cif Structure factors: contains datablock(s) 1. DOI: 10.1107/S2056989016005892/hg54711sup2.hkl Structure factors: contains datablock(s) 2. DOI: 10.1107/S2056989016005892/hg54712sup3.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989016005892/hg54711sup4.cml CCDC references: 1473151, 1473150 Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H12O6Z = 2
Mr = 276.24F(000) = 288
Triclinic, P1Dx = 1.401 Mg m3
a = 7.3722 (10) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.7235 (7) ÅCell parameters from 1905 reflections
c = 11.7032 (15) Åθ = 4.4–32.8°
α = 69.263 (10)°µ = 0.11 mm1
β = 87.519 (11)°T = 173 K
γ = 69.113 (10)°The symmetry employed for this shelxl refinement is uniquely defined by the following loop, which should always be used as a source of symmetry information in preference to the above space-group names. They are only intended as comments., colorless
V = 654.66 (14) Å30.33 × 0.26 × 0.11 mm
Agilent Xcalibur Eos Gemini diffractometer4296 independent reflections
Radiation source: Enhance (Mo) X-ray Source3087 reflections with I > 2σ(I)
Detector resolution: 16.0416 pixels mm-1Rint = 0.036
ω scansθmax = 32.7°, θmin = 3.2°
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014)h = −11→8
Tmin = 0.883, Tmax = 1.000k = −13→12
7360 measured reflectionsl = −16→17
Refinement on F213 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.055H-atom parameters constrained
wR(F2) = 0.156w = 1/[σ2(Fo2) + (0.0738P)2 + 0.0282P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
4296 reflectionsΔρmax = 0.36 e Å3
192 parametersΔρmin = −0.24 e Å3
Experimental. Absorption correction: CrysAlisPro (Agilent Technologies, 2014) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
O10.48459 (13)0.24436 (11)0.69118 (8)0.0225 (2)
O20.67011 (16)0.00141 (12)0.66239 (10)0.0336 (3)
O30.09094 (15)0.73883 (12)0.78120 (9)0.0264 (2)
O40.20400 (17)0.95648 (13)0.68569 (10)0.0332 (3)
O50.38600 (14)0.41942 (12)0.84842 (8)0.0238 (2)
C20.54690 (19)0.14688 (16)0.61566 (13)0.0234 (3)
C30.4606 (2)0.22921 (16)0.49018 (12)0.0235 (3)
H3A0.50120.16460.43720.028*
C40.32496 (19)0.39359 (16)0.44454 (12)0.0203 (2)
C110.2429 (2)0.47678 (18)0.31289 (12)0.0267 (3)
H11A0.29250.39030.27290.040*
H11B0.28230.57750.27110.040*
H11C0.10030.51700.30850.040*
C100.26109 (18)0.49190 (15)0.52589 (11)0.0183 (2)
C50.11893 (18)0.66244 (15)0.49057 (12)0.0209 (3)
H5A0.05960.71970.40860.025*
C60.06342 (19)0.74874 (15)0.57236 (12)0.0225 (3)
H6A−0.03390.86360.54730.027*
C70.15204 (19)0.66502 (15)0.69197 (12)0.0207 (2)
C80.29286 (18)0.49730 (15)0.72996 (11)0.0193 (2)
C90.34563 (17)0.41057 (14)0.64741 (12)0.0183 (2)
C120.1158 (2)0.89364 (16)0.76502 (13)0.0244 (3)
C130.0176 (3)0.9662 (2)0.85859 (16)0.0368 (4)
H13A0.06931.05280.86410.055*
H13B0.04210.87040.93860.055*
H13C−0.12311.02320.83470.055*
C140.3169 (3)0.3042 (2)0.93265 (14)0.0376 (4)
O6A0.1945 (8)0.2587 (9)0.9046 (3)0.0509 (11)0.755 (17)
C15A0.4350 (12)0.2219 (9)1.0560 (7)0.0572 (13)0.755 (17)
H15A0.55020.12081.05680.086*0.755 (17)
H15B0.35500.18271.12070.086*0.755 (17)
H15C0.47640.30901.07060.086*0.755 (17)
O6B0.150 (2)0.3148 (19)0.9106 (11)0.0509 (11)0.245 (17)
C15B0.406 (4)0.265 (3)1.051 (2)0.0572 (13)0.245 (17)
H15D0.33430.35841.08180.086*0.245 (17)
H15E0.54150.25861.04350.086*0.245 (17)
H15F0.40390.15231.10730.086*0.245 (17)
U11U22U33U12U13U23
O10.0247 (5)0.0181 (4)0.0211 (5)−0.0030 (3)−0.0014 (4)−0.0075 (3)
O20.0349 (6)0.0229 (5)0.0345 (6)−0.0005 (4)0.0013 (5)−0.0107 (4)
O30.0366 (5)0.0242 (4)0.0236 (5)−0.0127 (4)0.0108 (4)−0.0137 (4)
O40.0434 (6)0.0334 (5)0.0314 (6)−0.0202 (5)0.0118 (5)−0.0162 (4)
O50.0286 (5)0.0265 (4)0.0171 (4)−0.0115 (4)−0.0004 (4)−0.0069 (3)
C20.0247 (6)0.0201 (5)0.0263 (7)−0.0074 (5)0.0053 (5)−0.0105 (5)
C30.0276 (6)0.0242 (6)0.0239 (7)−0.0109 (5)0.0064 (5)−0.0135 (5)
C40.0227 (6)0.0237 (5)0.0196 (6)−0.0125 (5)0.0048 (5)−0.0099 (5)
C110.0313 (7)0.0320 (7)0.0204 (7)−0.0131 (6)0.0023 (5)−0.0118 (5)
C100.0194 (6)0.0198 (5)0.0178 (6)−0.0091 (4)0.0025 (4)−0.0072 (4)
C50.0218 (6)0.0207 (5)0.0189 (6)−0.0080 (4)0.0007 (5)−0.0052 (4)
C60.0232 (6)0.0183 (5)0.0236 (7)−0.0056 (4)0.0031 (5)−0.0070 (5)
C70.0242 (6)0.0207 (5)0.0211 (6)−0.0100 (5)0.0070 (5)−0.0109 (5)
C80.0217 (6)0.0206 (5)0.0163 (6)−0.0092 (4)0.0009 (4)−0.0058 (4)
C90.0184 (5)0.0157 (5)0.0207 (6)−0.0060 (4)0.0016 (4)−0.0066 (4)
C120.0278 (6)0.0237 (6)0.0240 (7)−0.0082 (5)0.0013 (5)−0.0122 (5)
C130.0480 (9)0.0391 (8)0.0367 (9)−0.0195 (7)0.0147 (7)−0.0266 (7)
C140.0538 (10)0.0411 (8)0.0212 (7)−0.0277 (7)0.0018 (7)−0.0045 (6)
O6A0.076 (2)0.061 (2)0.0308 (8)−0.053 (2)0.0009 (11)−0.0047 (13)
C15A0.088 (3)0.055 (3)0.0236 (12)−0.038 (3)−0.0136 (16)0.006 (2)
O6B0.076 (2)0.061 (2)0.0308 (8)−0.053 (2)0.0009 (11)−0.0047 (13)
C15B0.088 (3)0.055 (3)0.0236 (12)−0.038 (3)−0.0136 (16)0.006 (2)
O1—C91.3691 (14)C5—H5A0.9500
O1—C21.3906 (15)C6—C71.3910 (19)
O2—C21.2100 (16)C6—H6A0.9500
O3—C121.3731 (15)C7—C81.3829 (17)
O3—C71.3916 (15)C8—C91.3901 (17)
O4—C121.1945 (17)C12—C131.4898 (19)
O5—C141.3641 (17)C13—H13A0.9800
O5—C81.3921 (15)C13—H13B0.9800
C2—C31.4440 (19)C13—H13C0.9800
C3—C41.3502 (18)C14—O6A1.205 (4)
C3—H3A0.9500C14—O6B1.234 (14)
C4—C101.4544 (17)C14—C15B1.43 (2)
C4—C111.4973 (19)C14—C15A1.512 (7)
C11—H11A0.9800C15A—H15A0.9800
C11—H11B0.9800C15A—H15B0.9800
C11—H11C0.9800C15A—H15C0.9800
C10—C91.4005 (18)C15B—H15D0.9800
C10—C51.4045 (16)C15B—H15E0.9800
C5—C61.3810 (17)C15B—H15F0.9800
C9—O1—C2120.75 (10)C9—C8—O5120.50 (11)
C12—O3—C7117.51 (10)O1—C9—C8116.45 (11)
C14—O5—C8116.43 (11)O1—C9—C10122.58 (11)
O2—C2—O1116.03 (12)C8—C9—C10120.96 (11)
O2—C2—C3126.76 (13)O4—C12—O3122.90 (12)
O1—C2—C3117.20 (11)O4—C12—C13126.98 (13)
C4—C3—C2123.15 (12)O3—C12—C13110.12 (12)
C4—C3—H3A118.4C12—C13—H13A109.5
C2—C3—H3A118.4C12—C13—H13B109.5
C3—C4—C10118.48 (12)H13A—C13—H13B109.5
C3—C4—C11121.68 (12)C12—C13—H13C109.5
C10—C4—C11119.83 (11)H13A—C13—H13C109.5
C4—C11—H11A109.5H13B—C13—H13C109.5
C4—C11—H11B109.5O6A—C14—O5122.2 (2)
H11A—C11—H11B109.5O6B—C14—O5117.7 (6)
C4—C11—H11C109.5O6B—C14—C15B125.8 (15)
H11A—C11—H11C109.5O5—C14—C15B107.3 (11)
H11B—C11—H11C109.5O6A—C14—C15A125.4 (4)
C9—C10—C5118.01 (11)O5—C14—C15A111.6 (3)
C9—C10—C4117.84 (11)C14—C15A—H15A109.5
C5—C10—C4124.15 (12)C14—C15A—H15B109.5
C6—C5—C10121.47 (12)H15A—C15A—H15B109.5
C6—C5—H5A119.3C14—C15A—H15C109.5
C10—C5—H5A119.3H15A—C15A—H15C109.5
C5—C6—C7119.04 (11)H15B—C15A—H15C109.5
C5—C6—H6A120.5C14—C15B—H15D109.5
C7—C6—H6A120.5C14—C15B—H15E109.5
C8—C7—C6121.09 (11)H15D—C15B—H15E109.5
C8—C7—O3117.00 (11)C14—C15B—H15F109.5
C6—C7—O3121.65 (11)H15D—C15B—H15F109.5
C7—C8—C9119.41 (11)H15E—C15B—H15F109.5
C7—C8—O5120.05 (11)
C9—O1—C2—O2180.00 (11)O3—C7—C8—O5−8.72 (17)
C9—O1—C2—C30.67 (17)C14—O5—C8—C798.60 (15)
O2—C2—C3—C4−179.19 (13)C14—O5—C8—C9−83.97 (15)
O1—C2—C3—C40.07 (19)C2—O1—C9—C8179.93 (11)
C2—C3—C4—C10−0.66 (19)C2—O1—C9—C10−0.79 (17)
C2—C3—C4—C11178.16 (12)C7—C8—C9—O1−179.44 (10)
C3—C4—C10—C90.54 (17)O5—C8—C9—O13.11 (17)
C11—C4—C10—C9−178.31 (11)C7—C8—C9—C101.28 (18)
C3—C4—C10—C5−178.89 (11)O5—C8—C9—C10−176.18 (10)
C11—C4—C10—C52.27 (19)C5—C10—C9—O1179.64 (10)
C9—C10—C5—C60.16 (18)C4—C10—C9—O10.18 (18)
C4—C10—C5—C6179.58 (11)C5—C10—C9—C8−1.12 (18)
C10—C5—C6—C70.63 (18)C4—C10—C9—C8179.42 (11)
C5—C6—C7—C8−0.48 (19)C7—O3—C12—O4−7.8 (2)
C5—C6—C7—O3−174.49 (11)C7—O3—C12—C13171.97 (12)
C12—O3—C7—C8120.51 (13)C8—O5—C14—O6A6.8 (5)
C12—O3—C7—C6−65.25 (16)C8—O5—C14—O6B−20.6 (8)
C6—C7—C8—C9−0.46 (18)C8—O5—C14—C15B−169.5 (13)
O3—C7—C8—C9173.82 (11)C8—O5—C14—C15A177.4 (4)
C6—C7—C8—O5177.00 (11)
D—H···AD—HH···AD···AD—H···A
C6—H6A···O2i0.952.653.3465 (17)130
C13—H13A···O6Aii0.982.483.451 (5)173
C15A—H15B···O2iii0.982.523.401 (8)150
C20H16O6F(000) = 736
Mr = 352.33Dx = 1.357 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 5.2785 (3) ÅCell parameters from 9562 reflections
b = 16.3785 (8) Åθ = 2.5–30.4°
c = 20.0502 (11) ŵ = 0.10 mm1
β = 95.992 (2)°T = 200 K
V = 1723.95 (16) Å3Rod, colourless
Z = 40.55 × 0.14 × 0.11 mm
Bruker Quest diffractometer3859 reflections with I > 2σ(I)
ω scansRint = 0.035
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)θmax = 30.6°, θmin = 2.5°
Tmin = 0.658, Tmax = 0.746h = −7→6
24358 measured reflectionsk = −23→23
5276 independent reflectionsl = −28→28
Refinement on F213 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.057H-atom parameters constrained
wR(F2) = 0.142w = 1/[σ2(Fo2) + (0.0483P)2 + 1.0298P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
5276 reflectionsΔρmax = 0.37 e Å3
255 parametersΔρmin = −0.21 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
O10.4888 (2)0.14589 (6)0.70580 (6)0.0315 (3)
O20.7381 (3)0.03765 (8)0.70909 (7)0.0482 (4)
O3−0.0447 (2)0.37392 (7)0.67567 (6)0.0326 (3)
O40.1091 (2)0.50086 (8)0.66067 (7)0.0416 (3)
O50.0579 (2)0.21864 (7)0.64977 (5)0.0278 (2)
O60.3186 (2)0.22167 (8)0.56756 (6)0.0384 (3)
C20.7046 (3)0.10414 (10)0.73219 (8)0.0329 (3)
C30.8638 (3)0.14369 (10)0.78577 (8)0.0327 (3)
H3A1.00780.11500.80630.039*
C40.8176 (3)0.21931 (10)0.80793 (7)0.0289 (3)
C50.5425 (3)0.34519 (9)0.79035 (8)0.0309 (3)
H5A0.64810.37350.82400.037*
C60.3343 (3)0.38464 (10)0.75779 (8)0.0317 (3)
H6A0.29710.43950.76860.038*
C70.1793 (3)0.34264 (9)0.70865 (7)0.0272 (3)
C80.2314 (3)0.26251 (9)0.69265 (7)0.0249 (3)
C90.4453 (3)0.22431 (9)0.72504 (7)0.0253 (3)
C100.6024 (3)0.26439 (9)0.77514 (7)0.0263 (3)
C110.9821 (4)0.25697 (12)0.86536 (9)0.0394 (4)
H11D1.12440.22030.87940.056 (6)*
H11E0.88080.26590.90300.066 (7)*
H11F1.04840.30940.85120.068 (7)*
C12−0.0603 (3)0.45274 (10)0.65301 (8)0.0300 (3)
C13−0.3222 (3)0.46849 (11)0.61876 (10)0.0394 (4)
H13A−0.32070.52090.59420.047*
H13B−0.44200.47440.65330.047*
C14−0.4205 (4)0.40154 (13)0.56970 (11)0.0449 (5)
H14A−0.591 (5)0.4172 (15)0.5499 (13)0.067 (7)*
H14B−0.433 (4)0.3504 (13)0.5928 (11)0.042 (5)*
C15A−0.280 (2)0.3949 (8)0.5166 (7)0.0399 (16)0.55 (2)
C16A−0.147 (3)0.3912 (8)0.4725 (6)0.059 (2)0.55 (2)
H16A−0.04100.38820.43710.071*0.55 (2)
C15B−0.228 (3)0.3822 (10)0.5170 (8)0.0399 (16)0.45 (2)
C16B−0.084 (3)0.3704 (10)0.4775 (8)0.059 (2)0.45 (2)
H16B0.03370.36090.44550.071*0.45 (2)
C170.1254 (3)0.19905 (9)0.58756 (7)0.0258 (3)
C18−0.0746 (3)0.14582 (10)0.55133 (8)0.0300 (3)
H18A−0.24200.17340.54980.036*
H18B−0.08560.09390.57620.036*
C19−0.0149 (3)0.12754 (10)0.48024 (8)0.0341 (4)
H19A−0.01200.17940.45490.041*
H19B0.15670.10280.48190.041*
C20−0.2013 (4)0.07199 (10)0.44457 (8)0.0360 (4)
C21−0.3513 (4)0.02838 (12)0.41527 (10)0.0468 (5)
H21−0.4724−0.00680.39160.077 (8)*
U11U22U33U12U13U23
O10.0352 (6)0.0212 (5)0.0355 (6)−0.0018 (4)−0.0082 (5)−0.0036 (4)
O20.0545 (8)0.0302 (6)0.0553 (8)0.0084 (6)−0.0157 (6)−0.0085 (6)
O30.0307 (6)0.0262 (6)0.0396 (6)−0.0003 (4)−0.0019 (5)−0.0005 (5)
O40.0330 (6)0.0369 (7)0.0538 (8)−0.0062 (5)−0.0014 (5)0.0089 (6)
O50.0264 (5)0.0289 (5)0.0273 (5)−0.0056 (4)−0.0008 (4)−0.0043 (4)
O60.0324 (6)0.0449 (7)0.0383 (6)−0.0130 (5)0.0061 (5)−0.0084 (5)
C20.0373 (9)0.0238 (7)0.0358 (8)−0.0007 (6)−0.0042 (7)0.0024 (6)
C30.0333 (8)0.0288 (8)0.0341 (8)−0.0035 (6)−0.0057 (6)0.0062 (6)
C40.0309 (8)0.0293 (7)0.0253 (7)−0.0089 (6)−0.0025 (6)0.0049 (6)
C50.0413 (9)0.0268 (7)0.0233 (7)−0.0087 (6)−0.0024 (6)−0.0037 (6)
C60.0427 (9)0.0246 (7)0.0272 (7)−0.0031 (6)0.0009 (6)−0.0033 (6)
C70.0307 (7)0.0258 (7)0.0250 (7)−0.0014 (6)0.0024 (6)0.0006 (5)
C80.0276 (7)0.0239 (7)0.0227 (6)−0.0071 (6)0.0001 (5)−0.0018 (5)
C90.0312 (7)0.0192 (6)0.0249 (7)−0.0052 (6)0.0001 (5)0.0002 (5)
C100.0315 (7)0.0239 (7)0.0224 (7)−0.0072 (6)−0.0018 (5)0.0015 (5)
C110.0410 (9)0.0414 (10)0.0324 (8)−0.0080 (8)−0.0120 (7)0.0010 (7)
C120.0300 (8)0.0283 (8)0.0323 (8)0.0030 (6)0.0063 (6)−0.0008 (6)
C130.0309 (8)0.0318 (9)0.0544 (11)0.0021 (7)−0.0004 (7)−0.0005 (7)
C140.0344 (9)0.0408 (10)0.0570 (12)−0.0078 (8)−0.0078 (8)−0.0006 (9)
C15A0.043 (4)0.034 (4)0.0394 (10)−0.006 (3)−0.008 (2)−0.0004 (19)
C16A0.071 (5)0.057 (5)0.051 (2)−0.017 (3)0.008 (3)−0.008 (3)
C15B0.043 (4)0.034 (4)0.0394 (10)−0.006 (3)−0.008 (2)−0.0004 (19)
C16B0.071 (5)0.057 (5)0.051 (2)−0.017 (3)0.008 (3)−0.008 (3)
C170.0260 (7)0.0229 (7)0.0274 (7)0.0005 (5)−0.0014 (5)−0.0015 (5)
C180.0280 (7)0.0308 (8)0.0305 (8)−0.0053 (6)−0.0002 (6)−0.0060 (6)
C190.0399 (9)0.0331 (8)0.0282 (8)−0.0055 (7)−0.0009 (6)−0.0013 (6)
C200.0480 (10)0.0307 (8)0.0275 (8)0.0009 (7)−0.0041 (7)0.0001 (6)
C210.0602 (12)0.0379 (10)0.0390 (10)−0.0072 (9)−0.0103 (9)−0.0037 (8)
O1—C91.3675 (18)C11—H11E0.9800
O1—C21.3851 (19)C11—H11F0.9800
O2—C21.204 (2)C12—C131.501 (2)
O3—C121.3682 (19)C13—C141.527 (3)
O3—C71.3911 (19)C13—H13A0.9900
O4—C121.189 (2)C13—H13B0.9900
O5—C171.3705 (18)C14—C15A1.364 (13)
O5—C81.3889 (17)C14—C15B1.574 (15)
O6—C171.1931 (19)C14—H14A0.98 (3)
C2—C31.446 (2)C14—H14B0.96 (2)
C3—C41.347 (2)C15A—C16A1.186 (9)
C3—H3A0.9500C16A—H16A0.9500
C4—C101.453 (2)C15B—C16B1.169 (11)
C4—C111.501 (2)C16B—H16B0.9500
C5—C61.379 (2)C17—C181.497 (2)
C5—C101.402 (2)C18—C191.521 (2)
C5—H5A0.9500C18—H18A0.9900
C6—C71.394 (2)C18—H18B0.9900
C6—H6A0.9500C19—C201.470 (2)
C7—C81.385 (2)C19—H19A0.9900
C8—C91.391 (2)C19—H19B0.9900
C9—C101.3977 (19)C20—C211.177 (3)
C11—H11D0.9800C21—H210.9500
C9—O1—C2120.77 (12)O3—C12—C13109.55 (14)
C12—O3—C7121.60 (12)C12—C13—C14113.95 (15)
C17—O5—C8117.86 (11)C12—C13—H13A108.8
O2—C2—O1116.59 (14)C14—C13—H13A108.8
O2—C2—C3126.42 (16)C12—C13—H13B108.8
O1—C2—C3116.97 (14)C14—C13—H13B108.8
C4—C3—C2123.07 (15)H13A—C13—H13B107.7
C4—C3—H3A118.5C15A—C14—C13112.6 (6)
C2—C3—H3A118.5C13—C14—C15B112.2 (7)
C3—C4—C10118.56 (14)C15A—C14—H14A104.9 (16)
C3—C4—C11121.39 (15)C13—C14—H14A107.9 (15)
C10—C4—C11120.05 (14)C15B—C14—H14A114.3 (16)
C6—C5—C10121.75 (14)C15A—C14—H14B112.2 (14)
C6—C5—H5A119.1C13—C14—H14B110.5 (13)
C10—C5—H5A119.1C15B—C14—H14B103.3 (14)
C5—C6—C7118.88 (14)H14A—C14—H14B108.4 (19)
C5—C6—H6A120.6C16A—C15A—C14176.4 (14)
C7—C6—H6A120.6C15A—C16A—H16A180.0
C8—C7—O3114.71 (13)C16B—C15B—C14177.9 (16)
C8—C7—C6121.01 (14)C15B—C16B—H16B180.0
O3—C7—C6124.13 (14)O6—C17—O5123.07 (13)
C7—C8—O5119.98 (13)O6—C17—C18127.00 (14)
C7—C8—C9119.26 (13)O5—C17—C18109.93 (13)
O5—C8—C9120.45 (13)C17—C18—C19111.39 (13)
O1—C9—C8116.28 (12)C17—C18—H18A109.4
O1—C9—C10122.63 (14)C19—C18—H18A109.4
C8—C9—C10121.07 (13)C17—C18—H18B109.4
C9—C10—C5117.99 (14)C19—C18—H18B109.4
C9—C10—C4117.62 (14)H18A—C18—H18B108.0
C5—C10—C4124.39 (13)C20—C19—C18112.58 (14)
C4—C11—H11D109.5C20—C19—H19A109.1
C4—C11—H11E109.5C18—C19—H19A109.1
H11D—C11—H11E109.5C20—C19—H19B109.1
C4—C11—H11F109.5C18—C19—H19B109.1
H11D—C11—H11F109.5H19A—C19—H19B107.8
H11E—C11—H11F109.5C21—C20—C19179.00 (19)
O4—C12—O3124.34 (15)C20—C21—H21180.0
O4—C12—C13126.10 (15)
C9—O1—C2—O2−174.76 (15)O5—C8—C9—C10−171.09 (13)
C9—O1—C2—C36.7 (2)O1—C9—C10—C5179.15 (14)
O2—C2—C3—C4178.29 (18)C8—C9—C10—C5−2.0 (2)
O1—C2—C3—C4−3.3 (2)O1—C9—C10—C4−0.8 (2)
C2—C3—C4—C10−2.0 (2)C8—C9—C10—C4178.12 (13)
C2—C3—C4—C11177.73 (16)C6—C5—C10—C90.6 (2)
C10—C5—C6—C70.3 (2)C6—C5—C10—C4−179.52 (15)
C12—O3—C7—C8−141.36 (14)C3—C4—C10—C94.1 (2)
C12—O3—C7—C643.1 (2)C11—C4—C10—C9−175.69 (14)
C5—C6—C7—C80.3 (2)C3—C4—C10—C5−175.83 (15)
C5—C6—C7—O3175.49 (14)C11—C4—C10—C54.4 (2)
O3—C7—C8—O5−3.7 (2)C7—O3—C12—O4−1.9 (2)
C6—C7—C8—O5171.99 (14)C7—O3—C12—C13179.10 (14)
O3—C7—C8—C9−177.27 (13)O4—C12—C13—C14134.73 (19)
C6—C7—C8—C9−1.6 (2)O3—C12—C13—C14−46.3 (2)
C17—O5—C8—C7111.09 (16)C12—C13—C14—C15A−64.6 (6)
C17—O5—C8—C9−75.36 (17)C12—C13—C14—C15B−53.0 (7)
C2—O1—C9—C8176.26 (14)C8—O5—C17—O6−4.2 (2)
C2—O1—C9—C10−4.8 (2)C8—O5—C17—C18174.99 (12)
C7—C8—C9—O1−178.55 (13)O6—C17—C18—C19−4.7 (2)
O5—C8—C9—O17.9 (2)O5—C17—C18—C19176.16 (13)
C7—C8—C9—C102.5 (2)C17—C18—C19—C20177.12 (14)
D—H···AD—HH···AD···AD—H···A
C13—H13B···O4i0.992.433.244 (2)139
C18—H18A···O6i0.992.513.482 (2)167
  13 in total

1.  Crystal structure of 7,8-dihydroxy-4-methylcoumarin.

Authors:  Hiromasa Kurosaki; Rakesh K Sharma; Masami Otsuka; Masafumi Goto
Journal:  Anal Sci       Date:  2003-04       Impact factor: 2.081

2.  Lasing characteristics of new coumarin-analog dyes: broadband and narrow-1 inewidth performance.

Authors:  C H Chen; J L Fox; F J Duarte; J J Ehrlich
Journal:  Appl Opt       Date:  1988-02-01       Impact factor: 1.980

3.  An alkyne-aspirin chemical reporter for the detection of aspirin-dependent protein modification in living cells.

Authors:  Leslie A Bateman; Balyn W Zaro; Stephanie M Miller; Matthew R Pratt
Journal:  J Am Chem Soc       Date:  2013-09-18       Impact factor: 15.419

4.  Coherence characteristics of electrically excited tandem organic light-emitting diodes.

Authors:  F J Duarte; L S Liao; K M Vaeth
Journal:  Opt Lett       Date:  2005-11-15       Impact factor: 3.776

Review 5.  Chemical approaches for the detection and synthesis of acetylated proteins.

Authors:  Yu-Ying Yang; Howard C Hang
Journal:  Chembiochem       Date:  2011-01-11       Impact factor: 3.164

6.  Calreticulin transacetylase: a novel enzyme-mediated protein acetylation by acetoxy derivatives of 3-alkyl-4-methylcoumarins.

Authors:  Sarah Jalal; Karam Chand; Abha Kathuria; Prabhjot Singh; Nivedita Priya; Bhavna Gupta; Hanumantharao G Raj; Sunil K Sharma
Journal:  Bioorg Chem       Date:  2011-11-09       Impact factor: 5.275

7.  Bioorthogonal chemical reporters for monitoring protein acetylation.

Authors:  Yu-Ying Yang; Janice M Ascano; Howard C Hang
Journal:  J Am Chem Soc       Date:  2010-03-24       Impact factor: 15.419

Review 8.  Systematic overview of warfarin and its drug and food interactions.

Authors:  Anne M Holbrook; Jennifer A Pereira; Renee Labiris; Heather McDonald; James D Douketis; Mark Crowther; Philip S Wells
Journal:  Arch Intern Med       Date:  2005-05-23

9.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

10.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.