Literature DB >> 27298210

Flexibility unleashed in acyclic monoterpenes: conformational space of citronellal revealed by broadband rotational spectroscopy.

Sérgio R Domingos1, Cristóbal Pérez1, Chris Medcraft2, Pablo Pinacho3, Melanie Schnell1.   

Abstract

Conformational flexibility is intrinsically related to the functionality of biomolecules. Elucidation of the potential energy surface is thus a necessary step towards understanding the mechanisms for molecular recognition such as docking of small organic molecules to larger macromolecular systems. In this work, we use broadband rotational spectroscopy in a molecular jet experiment to unravel the complex conformational space of citronellal. We observe fifteen conformations in the experimental conditions of the molecular jet, the highest number of conformers reported to date for a chiral molecule of this size using microwave spectroscopy. Studies of relative stability using different carrier gases in the supersonic expansion reveal conformational relaxation pathways that strongly favour ground-state structures with globular conformations. This study provides a blueprint of the complex conformational space of an important biosynthetic precursor and gives insights on the relation between its structure and biological functionality.

Entities:  

Year:  2016        PMID: 27298210     DOI: 10.1039/c6cp02876d

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  3 in total

1.  Taming conformational heterogeneity in and with vibrational circular dichroism spectroscopy.

Authors:  Mark A J Koenis; Yiyin Xia; Sérgio R Domingos; Lucas Visscher; Wybren Jan Buma; Valentin P Nicu
Journal:  Chem Sci       Date:  2019-07-09       Impact factor: 9.825

2.  GEOM, energy-annotated molecular conformations for property prediction and molecular generation.

Authors:  Simon Axelrod; Rafael Gómez-Bombarelli
Journal:  Sci Data       Date:  2022-04-21       Impact factor: 8.501

3.  Direct regioisomer analysis of crude reaction mixtures via molecular rotational resonance (MRR) spectroscopy.

Authors:  Leo A Joyce; Danielle M Schultz; Edward C Sherer; Justin L Neill; Reilly E Sonstrom; Brooks H Pate
Journal:  Chem Sci       Date:  2020-06-08       Impact factor: 9.825

  3 in total

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