Literature DB >> 27295457

Multiscale Centerline Detection.

Amos Sironi, Engin Turetken, Vincent Lepetit, Pascal Fua.   

Abstract

Finding the centerline and estimating the radius of linear structures is a critical first step in many applications, ranging from road delineation in 2D aerial images to modeling blood vessels, lung bronchi, and dendritic arbors in 3D biomedical image stacks. Existing techniques rely either on filters designed to respond to ideal cylindrical structures or on classification techniques. The former tend to become unreliable when the linear structures are very irregular while the latter often has difficulties distinguishing centerline locations from neighboring ones, thus losing accuracy. We solve this problem by reformulating centerline detection in terms of a regression problem. We first train regressors to return the distances to the closest centerline in scale-space, and we apply them to the input images or volumes. The centerlines and the corresponding scale then correspond to the regressors local maxima, which can be easily identified. We show that our method outperforms state-of-the-art techniques for various 2D and 3D datasets. Moreover, our approach is very generic and also performs well on contour detection. We show an improvement above recent contour detection algorithms on the BSDS500 dataset.

Entities:  

Year:  2016        PMID: 27295457     DOI: 10.1109/TPAMI.2015.2462363

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  6 in total

1.  Automated 3D Soma Segmentation with Morphological Surface Evolution for Neuron Reconstruction.

Authors:  Donghao Zhang; Siqi Liu; Yang Song; Dagan Feng; Hanchuan Peng; Weidong Cai
Journal:  Neuroinformatics       Date:  2018-04

2.  Patch-Based Semantic Segmentation for Detecting Arterioles and Venules in Epifluorescence Imagery.

Authors:  Yasmin M Kassim; Olga V Glinskii; Vladislav V Glinsky; Virginia H Huxley; Kannappan Palaniappan
Journal:  IEEE Appl Imag Pattern Recognit Workshop       Date:  2019-05-09

3.  Deep neural network for automatic characterization of lesions on 68Ga-PSMA-11 PET/CT.

Authors:  Yu Zhao; Andrei Gafita; Bernd Vollnberg; Giles Tetteh; Fabian Haupt; Ali Afshar-Oromieh; Bjoern Menze; Matthias Eiber; Axel Rominger; Kuangyu Shi
Journal:  Eur J Nucl Med Mol Imaging       Date:  2019-12-07       Impact factor: 9.236

4.  Random Forests for Dura Mater Microvasculature Segmentation Using Epifluorescence Images.

Authors:  Yasmin M Kassim; V B Surya Prasath; Rengarajan Pelapur; Olga V Glinskii; Richard J Maude; Vladislav V Glinsky; Virginia H Huxley; Kannappan Palaniappan
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2016-08

5.  Automated Neuron Reconstruction from 3D Fluorescence Microscopy Images Using Sequential Monte Carlo Estimation.

Authors:  Miroslav Radojević; Erik Meijering
Journal:  Neuroinformatics       Date:  2019-07

6.  Ex vivo evaluation of an atherosclerotic human coronary artery via histology and high-resolution hard X-ray tomography.

Authors:  Marzia Buscema; Simone E Hieber; Georg Schulz; Hans Deyhle; Alexander Hipp; Felix Beckmann; Johannes A Lobrinus; Till Saxer; Bert Müller
Journal:  Sci Rep       Date:  2019-10-04       Impact factor: 4.379

  6 in total

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