| Literature DB >> 27294145 |
Hanne Due1, Pernille Svendsen2, Julie Støve Bødker2, Alexander Schmitz2, Martin Bøgsted3, Hans Erik Johnsen4, Tarec Christoffer El-Galaly4, Anne Stidsholt Roug5, Karen Dybkær6.
Abstract
MicroRNAs have the potential to be useful biomarkers in the development of individualized treatment since they are easy to detect, are relatively stable during sample handling, and are important determinants of cellular processes controlling pathogenesis, progression, and response to treatment of several types of cancers including B-cell malignancies. miR-155 is an oncomiR with a crucial role in tumor initiation and development of several B-cell malignancies. The present review elucidates the potential of miR-155 as a diagnostic, prognostic, or predictive biomarker in B-cell malignancies using a systematic search strategy to identify relevant literature. miR-155 was upregulated in several malignancies compared to nonmalignant controls and overexpression of miR-155 was further associated with poor prognosis. Elevated expression of miR-155 shows potential as a diagnostic and prognostic biomarker in diffuse large B-cell lymphoma and chronic lymphocytic leukemia. Additionally, in vitro and in vivo studies suggest miR-155 as an efficient therapeutic target, supporting its oncogenic function. The use of inhibiting anti-miR structures indicates promising potential as novel anticancer therapeutics. Reports from 53 studies prove that miR-155 has the potential to be a molecular tool in personalized medicine.Entities:
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Year: 2016 PMID: 27294145 PMCID: PMC4884835 DOI: 10.1155/2016/9513037
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Cancer relevant target genes for miR-155 supported by experimental observations.
| Target genes | Main effect of aberrant miR-155 expression | Reference |
|---|---|---|
| SHIP1 | ↑ PI3K/AKT activity | [ |
| ↑ B-cell proliferation | ||
| AID | ↑ immunoglobulin diversification/class switch | [ |
| PU.1 | ↑ immunoglobulin diversification/class switch | [ |
| HGAL | ↑ cell motility | [ |
| C/EBP | ↑ B-cell proliferation | [ |
| SMAD5 | ↑ evasion of TGF- | [ |
| FADD | ↓ apoptosis | [ |
| Ripk | ↓ apoptosis | [ |
| SOCS1 | ↑ STAT5 activation | [ |
AID, activation-induced cytidine deaminase; C/EBPβ, CCAAT/enhancer-binding protein β; FADD, Fas-Associated protein with Death Domain; HGAL, human germinal center-associated lymphoma; SHIP1, SH2 domain containing inositol 5′-phosphatase 1; SOCS1, suppressor of cytokine signaling protein 1.
miR-155 as diagnostic biomarker in B-cell malignancies.
| Disease | Sample type | Cohort | Initial miRNA selection | Method | Expression | Ref | |
|---|---|---|---|---|---|---|---|
| DLBCL | FFPE | 90 DLBCL cases | Previous research | RT-qPCR | ↑ | [ | |
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| DLBCL | CS | 75 DLBCL cases | T | Global screening | Microarray | ↑ |
[ |
| FFPE | 47 DLBCL cases | V | RT-qPCR | ↑ | |||
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| DLBCL | Blood | 20 DLBCL cases | T | Previous research | RT-qPCR | ↑ |
[ |
| 75 DLBCL cases | V | ↑ | |||||
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| DLBCL | FFPE | 80 DLBCL cases | Global screening | Microarray | ↑ |
[ | |
| 80 DLBCL cases | NS | ||||||
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| DLBCL | FFPE | 11 PCNSL cases | Previous research | RT-qPCR | ↑ | [ | |
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| DLBCL | CS, FFPE | 35 DLBCL cases | Global screening | RT-qPCR | ↑ |
[ | |
| 35 DLBCL cases | NS | ||||||
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| DLBCL | CS, FFPE | 18 DLBCL cases | Previous research | RNA-ISH | ↑ |
[ | |
| RT-qPCR | ↑ | ||||||
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| DLBCL | CS | 29 DLBCL cases | T | Global screening | Microarray | ↑ |
[ |
| FFPE | 43 DLBCL cases | V | RT-qPCR | ↑ | |||
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| DLBCL | Blood | 60 DLBCL cases | Previous research | RT-qPCR | ↑ | [ | |
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| DLBCL | FFPE | 19 DLBCL cases | Previous research | RT-qPCR | NS | [ | |
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| DLBCL | CS | 22 DLBCL cases | Previous research | RT-qPCR | ↑ | [ | |
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| DLBCL | CS | 79 DLBCL cases | Global screening | Microarray | ↑ | [ | |
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| DLBCL | CS | 23 DLBCL cases | Previous research | RT-qPCR | ↑ | [ | |
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| DLBCL | FNAB | 45 DLBCL cases | Previous research | RT-qPCR | ↑ |
[ | |
| 45 DLBCL cases | ↑ | ||||||
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| DLBCL | FFPE | 200 DLBCL cases | Previous research | RT-qPCR | ↑ | [ | |
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| DLBCL | CS | 10 DLBCL EBV− cases | Global screening | Sequencing | ↑ |
[ | |
| RT-qPCR | NS | ||||||
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| DLBCL | FFPE | 58 DLBCL cases | Global screening | RT-qPCR | ↑ |
[ | |
| 58 DLBCL cases | NS | ||||||
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| DLBCL | Ocular fluid | 17 retinal DLBCL cases | Global screening | RT-qPCR | ↓ | [ | |
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| BL | CS | 6 BL | Previous research | RT-qPCR | ↓ | [ | |
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| BL | FFPE | 3 BL cases | Previous research | Northern blot | ↓ | [ | |
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| BL | CS | 11 BL cases | Previous research | RT-qPCR | ↓ | [ | |
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| BL | CS | 12 BL cases | Global screening | Microarray | ↓ | [ | |
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| HL | FFPE | 42 HL cases | Global screening | Microarray | NS |
[ | |
| RT-qPCR | NS | ||||||
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| HL | CS | 25 HL cases | Previous research | RT-qPCR | ↑ | [ | |
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| HL | CS, FFPE | 5 HL cases | Previous research | RT-qPCR | NS | [ | |
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| MALT | CS | 22 MALT cases | Previous research | RT-qPCR | ↑ | [ | |
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| MALT | CS | 4 MALT cases | T | Global screening | Microarray | ↑ |
[ |
| 14 MALT cases | V | RT-qPCR | ↑ | ||||
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| MALT | CS | 3 MALT cases | T | Global screening | Microarray | ↑ |
[ |
| 20 MALT cases | V | RT-qPCR | ↑ | ||||
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| FL | BM | 5 FL cases | Previous research | RT-qPCR | NS | [ | |
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| SMZL | FFPE | 15 SMZL cases | Global screening | RT-qPCR | ↑ | [ | |
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| SMZL | CS | 31 SMZL cases | T | Global screening | Microarray | ↑ |
[ |
| FFPE | 77 SMZL cases | V | RT-qPCR | ↑ | |||
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| SMZL | CS | 15 SMZL cases | Global screening | Microarray | ↑ |
[ | |
| RT-qPCR | ↑ | ||||||
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| CLL | CS | 70 CLL cases | Previous research | RT-qPCR | ↑ | [ | |
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| CLL | Blood | 6 CLL cases | Global screening | Microarray | ↑ | [ | |
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| CLL | Blood | 7 CLL cases | Previous research | Northern blot | ↑ | [ | |
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| CLL | Blood | 69 CLL cases | Global screening | Nanostring | ↑ |
[ | |
| RT-qPCR | ↑ | ||||||
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| CLL | Blood | 113 CLL cases | Previous research | RT-qPCR | ↑ | [ | |
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| CLL | Blood | 50 CLL cases | Global screening | Microarray | ↑ |
[ | |
| RT-qPCR | ↑ | ||||||
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| CLL | Blood | 38 CLL cases | Global screening | Microarray | ↑ | [ | |
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| CLL | Blood | 56 CLL cases | Previous research | RT-qPCR | ↑ | [ | |
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| CLL | Blood | 70 CLL cases | T | Previous research | RT-qPCR | ↑ |
[ |
| 23 CLL cases | V | RT-qPCR | ↑ | ||||
Disease: DLBCL, diffuse large B-cell lymphoma; BL, Burkitt's lymphoma; HL, Hodgkin lymphoma; MALT, mucosa-associated lymphoid tissue; FL, follicular lymphoma; SMZL, splenic marginal zone lymphoma; CLL, chronic lymphocytic leukemia. Sample type: FFPE, formalin-fixed paraffin-embedded tissue samples; CS, clinical samples; FNABs, fine needle aspirations. Cohort: controls, nonmalignant tissues; PCNSL, primary CNS lymphoma; nDLBCL, nodal DLBCL; exN DLBCL, extranodal DLBCL; EBV, Epstein-Barr virus; L, lymphoma; control, adjacent normal tissue, T; training set; V, validation set. Method: RT-qPCR, reverse transcription quantitative PCR; RNA-ISH, RNA in situ hybridization. Expression: ↑, increased; ↓, decreased; NS, not significant. Ref: reference.
miR-155 as prognostic biomarker in diffuse large B-cell lymphoma (DLBCL), its expression in relation to GCB or nGCB/ABC subtyping, and direct relation to prognosis.
| Cohort | Molecular subtype | Sample type | Initial miR selection | Method | Outcome | Ref | ||
|---|---|---|---|---|---|---|---|---|
| Prognosis | Measure | Molecular subtype | ||||||
| 90 DLBCL | 21 GCB | FFPE | Previous research | RT-qPCR | ↑ poor | RA, OR | ↑ nGCB | [ |
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| 20 GCB | FFPE | Global screening | RT-qPCR | ↑ nGCB | [ | |||
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| 32 GCB | FFPE | Global screening | Microarray | ↑ nGCB | [ | |||
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| 9 GCB | FFPE | Previous research | RT-qPCR | NS | [ | |||
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| 85 GCB | CS | Previous research | Microarray | ↑ ABC | [ | |||
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| 17 GCB | CS, FFPE | Global screening | RT-qPCR | ↑ ABC | [ | |||
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| 11 GCB | CS, FFPE | Previous research | ISH | ↑ ABC | [ | |||
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| 9 GCB | FFPE | Previous research | ISH | NS | [ | |||
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| 8 GCB | CS | Previous research | RT-qPCR | NS | [ | |||
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| 54 DLBCL | 32 GCB | CS | Global screening | Microarray | ↑ poor | EFS | ↑ ABC | [ |
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| 4 GCB | CS | Previous research | RT-qPCR | ↑ ABC | [ | |||
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| 129 DLBCL | CS | Previous research | NS | PFS, OS |
[ | |||
| 24 ABC | ↑ improved | PFS, OS | ||||||
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| 53 DLBCL | 25 GCB | FFPE | Previous research | RT-qPCR | NS | EFS, OS | ↑ nGCB | [ |
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| 14 GCB | FFPE | Previous research | RT-qPCR | NS | [ | |||
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| 200 DLBCL | FFPE | Previous research | NS | PFS, OS | [ | |||
( / ) in column 1: number of patients with high and low miR-155 expression; numbers in column 2 indicate how many DLBCL patients included for miR-155 expression evaluation in each molecular subtype; subtype: GCB, germinal center B-cell-like; nGCB, non-GCB; ABC, activated B-cell-like. Sample type: FFPE, formalin-fixed paraffin-embedded tissue samples; CS, clinical samples. Method: RT-qPCR, reverse transcription quantitative PCR; ISH, in situ hybridization. Prognosis: ↑, increased expression; ↓, decreased expression; NS, not significant. Outcome measure: RA, response assessment; OR, overall response; EFS, event-free survival; PFS, progression-free survival; OS, overall survival. Ref: reference.
Figure 1Studies (n = 5) exploiting miR-155 as a therapeutic target using anti-miR-155 structures. PNA, peptide nucleic acid; LNA, locked nucleic acid; CLL, chronic lymphocytic leukemia; WM, Waldenstrom macroglobulinemia; DLBCL, diffuse large B-cell lymphoma; EBV+, Epstein-Barr virus positive; EBV−, Epstein-Barr virus negative.
miR-155 as prognostic biomarker in CLL, its expression in relation to established prognostic factors, and direct relation to prognosis.
| Cohort | Sample type | Initial miR selection | Method | Outcome | Ref | ||||
|---|---|---|---|---|---|---|---|---|---|
| Unfavorable factors | Favorable factors | Prognosis | Measure | ||||||
| 70 | CS | Previous research | RT-qPCR | ↑ | ↑ | [ | |||
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| 109 (56/53) | CS | Previous research | nCounter | ↑ | ↓ | ↑ poor | OS |
[ | |
| 9 (4/5) | Blood | ↑ poor | Relapse | ||||||
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| 8 (4/4) | Blood | Previous research | Northern blot | NS | [ | ||||
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| 43 (18/25) | Blood | Previous research | RT-qPCR | NS | NS | [ | |||
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| 70 | T | Blood | Global screening | Microarray | ↑ |
[ | |||
| 24 | V | RT-qPCR | ↑ | ||||||
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| 70 (33/37) | FFPE | Previous research | RT-qPCR | NS | NS | [ | |||
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| 50 | Blood | Global screening | Microarray | NS | NS | [ | |||
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| 143 | Blood | Previous research | RT-qPCR | NS | NS | ↑ poor | RA |
[ | |
| 85 (31/45) | ↑ poor | RA | |||||||
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| 86 (55/31) | T | Blood | Previous research | RT-qPCR | ↑ | ↓ | ↑ poor | TFS |
[ |
| 181 (95/86) | V | Microarray | ↑ | ↓ | ↑ poor | TFS | |||
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| 94 | T | CS | Global screening | Microarray | ↑ | ↑ poor | TIT |
[ | |
| 50 | V | ↑ | |||||||
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| 61 | T | CS | Global screening | Microarray RT-qPCR | ↑ | ↓ |
[ | ||
| 29 | V | ↑ | ↓ | ||||||
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| 104 (64/40) | Blood | Previous research | RT-qPCR | ↑ | NS | OS | [ | ||
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| 56 | Blood | Previous research | RT-qPCR | NS | NS | [ | |||
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| 28 | Blood | Global screening | Microarray | NS | NS | NS | TIT | [ | |
Cohort: T, training set; V, validation set. Sample type: CS, clinical sample; FFPE, formalin-fixed paraffin-embedded tissue samples. Method: RT-qPCR, reverse transcription quantitative PCR. Outcome: unfavorable factors: 17p deletion, 11q deletion, trisomy 12, CD38+ cells, ZAP-70 expression > 20%, and/or advanced disease stage determined by either Rai or Binet. Favorable factors: normal karyotype, IgHV mutations, and/or 13q deletion [76]; ↑, increased expression; ↓, decreased expression; NS, not significant. Outcome measure: OS, overall survival; PFS, progression-free survival; RA, response assessment; TFS, treatment-free survival; TI, time to initial treatment. Ref: reference.