Literature DB >> 27292444

Clinical utility of next-generation sequencing in the diagnosis of hereditary haemolytic anaemias.

Archana M Agarwal1, Roberto H Nussenzveig2, Noel S Reading2, Jay L Patel1, Nikhil Sangle3, Mohamed E Salama1, Josef T Prchal4, Sherrie L Perkins1, Hassan M Yaish5, Robert D Christensen6.   

Abstract

Hereditary haemolytic anaemias are genetically and phenotypically heterogeneous disorders characterized by increased red cell destruction, with consequences ranging from innocuous to severe life-threatening anaemia. Diagnostic laboratories endeavour to assist clinicians reach the exact patient diagnosis by using tests principally based on morphological and biochemical techniques. However, these routine studies may be inconclusive, particularly in newborn infants and when transfusions have recently been administered. Large numbers and size of the potentially involved genes also impose a practical challenge for molecular diagnosis using routine sequencing approaches. To overcome these diagnostic shortcomings, we have utilized next-generation sequencing to provide a high-throughput, highly sensitive assay. We developed a panel interrogating 28 genes encoding cytoskeletal proteins and enzymes with sequencing coverage of the coding regions, splice site junctions, deep intronic and regulatory regions. We then evaluated 19 samples, including infants with unexplained extreme hyperbilirubinaemia and patients with transfusion-dependent haemolytic anaemia. Where possible, inheritance patterns of pathogenic mutations were determined by sequencing of immediate relatives. We conclude that this next-generation sequencing panel could be a cost-effective approach to molecular diagnosis of hereditary haemolytic anaemia, especially when the family history is uninformative or when routine laboratory testing fails to identify the causative haemolytic process.
© 2016 John Wiley & Sons Ltd.

Entities:  

Keywords:  RBC membrane defect; haemolytic anaemia; hereditary anaemias; hereditary spherocytosis; next generation sequencing

Mesh:

Substances:

Year:  2016        PMID: 27292444     DOI: 10.1111/bjh.14131

Source DB:  PubMed          Journal:  Br J Haematol        ISSN: 0007-1048            Impact factor:   6.998


  27 in total

1.  Rapid Identification of Biallelic SPTB Mutation in a Neonate with Severe Congenital Hemolytic Anemia and Liver Failure.

Authors:  Christopher M Richmond; Sally Campbell; Hee W Foo; Sebastian Lunke; Zornitza Stark; Amanda Moody; Elizabeth Bannister; Anthea Greenway; Natasha Brown
Journal:  Mol Syndromol       Date:  2020-02-01

2.  A novel SPTB mutation causes hereditary spherocytosis via loss-of-function of β-spectrin.

Authors:  Shan Li; Ping Guo; Leyuan Mi; Xiaojing Chai; Kewang Xi; Ting Liu; Li Lu; Juan Li
Journal:  Ann Hematol       Date:  2022-01-31       Impact factor: 3.673

Review 3.  Korean clinical practice guidelines for the diagnosis of hereditary hemolytic anemia.

Authors:  Hee Won Chueh; Sang Mee Hwang; Ye Jee Shim; Jae Min Lee; Hee Sue Park; Joon Hee Lee; Youngwon Nam; Namhee Kim; Hye Lim Jung; Hyoung Soo Choi
Journal:  Blood Res       Date:  2022-05-20

4.  Addressing the diagnostic gaps in pyruvate kinase deficiency: Consensus recommendations on the diagnosis of pyruvate kinase deficiency.

Authors:  Paola Bianchi; Elisa Fermo; Bertil Glader; Hitoshi Kanno; Archana Agarwal; Wilma Barcellini; Stefan Eber; James D Hoyer; David J Kuter; Tabita Magalhães Maia; Maria Del Mar Mañu-Pereira; Theodosia A Kalfa; Serge Pissard; José-Carlos Segovia; Eduard van Beers; Patrick G Gallagher; David C Rees; Richard van Wijk
Journal:  Am J Hematol       Date:  2018-11-28       Impact factor: 10.047

Review 5.  Laboratory Approach to Hemolytic Anemia.

Authors:  Manu Jamwal; Prashant Sharma; Reena Das
Journal:  Indian J Pediatr       Date:  2019-12-10       Impact factor: 1.967

6.  Clinical utility of targeted gene enrichment and sequencing technique in the diagnosis of adult hereditary spherocytosis.

Authors:  Jun Xue; Qing He; Xiaojing Xie; Ailing Su; Shibin Cao
Journal:  Ann Transl Med       Date:  2019-10

7.  Infantile Pyknocytosis: End-Tidal CO, %Micro-R Measurements, Next-Generation Sequencing, and Transfusion Avoidance with Darbepoetin.

Authors:  Timothy M Bahr; Mari C Knudsen; Michell Lozano-Chinga; Archana M Agarwal; Jessica A Meznarich; Robin K Ohls; Robert D Christensen
Journal:  Biomed Hub       Date:  2020-12-11

8.  Identification of a novel de novo ANK1 R1426* nonsense mutation in a Chinese family with hereditary spherocytosis by NGS.

Authors:  Xiong Wang; Bin Yi; Ketao Mu; Na Shen; Yaowu Zhu; Qun Hu; Yanjun Lu
Journal:  Oncotarget       Date:  2017-05-27

9.  Targeted Next Generation Sequencing and Diagnosis of Congenital Hemolytic Anemias: A Three Years Experience Monocentric Study.

Authors:  Elisa Fermo; Cristina Vercellati; Anna Paola Marcello; Ebru Yilmaz Keskin; Silverio Perrotta; Anna Zaninoni; Valentina Brancaleoni; Alberto Zanella; Juri A Giannotta; Wilma Barcellini; Paola Bianchi
Journal:  Front Physiol       Date:  2021-05-21       Impact factor: 4.566

10.  Using Genomic Information to Guide Ibrutinib Treatment Decisions in Chronic Lymphocytic Leukaemia: A Cost-Effectiveness Analysis.

Authors:  James Buchanan; Sarah Wordsworth; Ruth Clifford; Pauline Robbe; Jenny C Taylor; Anna Schuh; Samantha J L Knight
Journal:  Pharmacoeconomics       Date:  2017-08       Impact factor: 4.981

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