Literature DB >> 27281421

Comparing CRISPR and RNAi-based screening technologies.

Benjamin E Housden1, Norbert Perrimon1,2.   

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Year:  2016        PMID： 27281421     DOI： 10.1038/nbt.3599

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  10 in total

1.  Identification and characterization of essential genes in the human genome.

Authors:  Tim Wang; Kıvanç Birsoy; Nicholas W Hughes; Kevin M Krupczak; Yorick Post; Jenny J Wei; Eric S Lander; David M Sabatini
Journal:  Science       Date:  2015-10-15       Impact factor: 47.728

Review 2.  RNAi screening comes of age: improved techniques and complementary approaches.

Authors:  Stephanie E Mohr; Jennifer A Smith; Caroline E Shamu; Ralph A Neumüller; Norbert Perrimon
Journal:  Nat Rev Mol Cell Biol       Date:  2014-09       Impact factor: 94.444

3.  CRISPR knockout screening outperforms shRNA and CRISPRi in identifying essential genes.

Authors:  Bastiaan Evers; Katarzyna Jastrzebski; Jeroen P M Heijmans; Wipawadee Grernrum; Roderick L Beijersbergen; Rene Bernards
Journal:  Nat Biotechnol       Date:  2016-04-25       Impact factor: 54.908

4.  Genome-scale CRISPR-Cas9 knockout screening in human cells.

Authors:  Ophir Shalem; Neville E Sanjana; Ella Hartenian; Xi Shi; David A Scott; Tarjei Mikkelson; Dirk Heckl; Benjamin L Ebert; David E Root; John G Doench; Feng Zhang
Journal:  Science       Date:  2013-12-12       Impact factor: 47.728

5.  Multiplex genome engineering using CRISPR/Cas systems.

Authors:  Le Cong; F Ann Ran; David Cox; Shuailiang Lin; Robert Barretto; Naomi Habib; Patrick D Hsu; Xuebing Wu; Wenyan Jiang; Luciano A Marraffini; Feng Zhang
Journal:  Science       Date:  2013-01-03       Impact factor: 47.728

6.  RNA-guided human genome engineering via Cas9.

Authors:  Prashant Mali; Luhan Yang; Kevin M Esvelt; John Aach; Marc Guell; James E DiCarlo; Julie E Norville; George M Church
Journal:  Science       Date:  2013-01-03       Impact factor: 47.728

7.  Measuring error rates in genomic perturbation screens: gold standards for human functional genomics.

Authors:  Traver Hart; Kevin R Brown; Fabrice Sircoulomb; Robert Rottapel; Jason Moffat
Journal:  Mol Syst Biol       Date:  2014-07-01       Impact factor: 11.429

8.  Parallel shRNA and CRISPR-Cas9 screens enable antiviral drug target identification.

Authors:  Richard M Deans; David W Morgens; Ayşe Ökesli; Sirika Pillay; Max A Horlbeck; Martin Kampmann; Luke A Gilbert; Amy Li; Roberto Mateo; Mark Smith; Jeffrey S Glenn; Jan E Carette; Chaitan Khosla; Michael C Bassik
Journal:  Nat Chem Biol       Date:  2016-03-28       Impact factor: 15.040

9.  Systematic comparison of CRISPR/Cas9 and RNAi screens for essential genes.

Authors:  David W Morgens; Richard M Deans; Amy Li; Michael C Bassik
Journal:  Nat Biotechnol       Date:  2016-05-09       Impact factor: 54.908

10.  Molecular biology. Use and abuse of RNAi to study mammalian gene function.

Authors:  William G Kaelin
Journal:  Science       Date:  2012-07-27       Impact factor: 47.728
  10 in total
  17 in total

1.  Genomic Amplifications Cause False Positives in CRISPR Screens.

Authors:  Ankur Sheel; Wen Xue
Journal:  Cancer Discov       Date:  2016-08       Impact factor: 39.397

2.  CRISPR-Cas9-based genome-wide screening identified novel targets for treating sorafenib-resistant hepatocellular carcinoma: a cross-talk between FGF21 and the NRF2 pathway.

Authors:  Jiang Chen; Shi Jiang; Huijiang Shao; Bixia Li; Tong Ji; Daniel Staiculescu; Jiayan He; Jie Zhao; Liuxin Cai; Xiao Liang; Junjie Xu; Xiujun Cai
Journal:  Sci China Life Sci       Date:  2022-04-01       Impact factor: 10.372

3.  SLC35B2 Acts in a Dual Role in the Host Sulfation Required for EV71 Infection.

Authors:  Dong Guo; Xinghai Yu; Dan Wang; Zhifei Li; Yu Zhou; Guodong Xu; Bing Yuan; Yali Qin; Mingzhou Chen
Journal:  J Virol       Date:  2022-04-14       Impact factor: 6.549

4.  Efficient generation of isogenic primary human myeloid cells using CRISPR-Cas9 ribonucleoproteins.

Authors:  Joseph Hiatt; Devin A Cavero; Michael J McGregor; Weihao Zheng; Jonathan M Budzik; Theodore L Roth; Kelsey M Haas; David Wu; Ujjwal Rathore; Anke Meyer-Franke; Mohamed S Bouzidi; Eric Shifrut; Youjin Lee; Vigneshwari Easwar Kumar; Eric V Dang; David E Gordon; Jason A Wojcechowskyj; Judd F Hultquist; Krystal A Fontaine; Satish K Pillai; Jeffery S Cox; Joel D Ernst; Nevan J Krogan; Alexander Marson
Journal:  Cell Rep       Date:  2021-05-11       Impact factor: 9.423

Review 5.  Advances in Engineering the Fly Genome with the CRISPR-Cas System.

Authors:  Ethan Bier; Melissa M Harrison; Kate M O'Connor-Giles; Jill Wildonger
Journal:  Genetics       Date:  2018-01       Impact factor: 4.562

6.  RNAi-mediated control of CRISPR functions.

Authors:  Xinbo Huang; Zhicong Chen; Yuchen Liu
Journal:  Theranostics       Date:  2020-05-17       Impact factor: 11.556

7.  CRISPR/Cas9-targeted mutagenesis of the tomato susceptibility gene PMR4 for resistance against powdery mildew.

Authors:  Miguel I Santillán Martínez; Valentina Bracuto; Eleni Koseoglou; Michela Appiano; Evert Jacobsen; Richard G F Visser; Anne-Marie A Wolters; Yuling Bai
Journal:  BMC Plant Biol       Date:  2020-06-19       Impact factor: 4.215

8.  Genome-wide CRISPR/Cas9 library screening identified PHGDH as a critical driver for Sorafenib resistance in HCC.

Authors:  Lai Wei; Derek Lee; Cheuk-Ting Law; Misty Shuo Zhang; Jialing Shen; Don Wai-Ching Chin; Allen Zhang; Felice Ho-Ching Tsang; Ceci Lok-Sze Wong; Irene Oi-Lin Ng; Carmen Chak-Lui Wong; Chun-Ming Wong
Journal:  Nat Commun       Date:  2019-10-15       Impact factor: 14.919

9.  Specific Gene Disruption in the Major Livestock Pests Cochliomyia hominivorax and Lucilia cuprina Using CRISPR/Cas9.

Authors:  Daniel F Paulo; Megan E Williamson; Alex P Arp; Fang Li; Agustin Sagel; Steven R Skoda; Joel Sanchez-Gallego; Mario Vasquez; Gladys Quintero; Adalberto A Pérez de León; Esther J Belikoff; Ana M L Azeredo-Espin; W Owen McMillan; Carolina Concha; Maxwell J Scott
Journal:  G3 (Bethesda)       Date:  2019-09-04       Impact factor: 3.154

10.  Knocking Out SST Gene of BGC823 Gastric Cancer Cell by CRISPR/Cas9 Enhances Migration, Invasion and Expression of SEMA5A and KLF2.

Authors:  Wei Chen; Ruixian Ding; Jinlu Tang; Haodong Li; Chonghua Chen; Yaru Zhang; Qinxian Zhang; Xiaoyan Zhu
Journal:  Cancer Manag Res       Date:  2020-02-20       Impact factor: 3.989
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