| Literature DB >> 27281020 |
James Lester1, Sarah Paige2,3, Colin A Chapman4, Mhairi Gibson5, James Holland Jones6, William M Switzer7, Nelson Ting8, Tony L Goldberg2,3, Simon D W Frost1.
Abstract
Syndromic surveillance, the collection of symptom data from individuals prior to or in the absence of diagnosis, is used throughout the developed world to provide rapid indications of outbreaks and unusual patterns of disease. However, the low cost of syndromic surveillance also makes it highly attractive for the developing world. We present a case study of electronic participatory syndromic surveillance, using participant-mobile phones in a rural region of Western Uganda, which has a high infectious disease burden, and frequent local and regional outbreaks. Our platform uses text messages to encode a suite of symptoms, their associated durations, and household disease burden, and we explore the ability of participants to correctly encode their symptoms, with an average of 75.2% of symptom reports correctly formatted between the second and 11th reporting timeslots. Concomitantly we identify divisions between participants able to rapidly adjust to this unusually participatory style of data collection, and those few for whom the study proved more challenging. We then perform analyses of the resulting syndromic time series, examining the clustering of symptoms by time and household to identify patterns such as a tendency towards the within-household sharing of respiratory illness.Entities:
Mesh:
Year: 2016 PMID: 27281020 PMCID: PMC4900526 DOI: 10.1371/journal.pone.0155971
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Comparison of a range of approaches to syndromic surveillance.
| Surveillance approach | Included population | Participant requirements | Administrator requirements | Technology required | Scaling | Advantages | Disadvantages |
|---|---|---|---|---|---|---|---|
| Recruited participants | Time to complete interview, possibly transport to venue. | Trained interviewers, scripts. | Pen and paper/tablet computer | Poor. Additional participants necessitate greater interviewing effort. | Thorough disease reports, miscommunications may be avoided. Participants may feel more engaged. | Trained interviewers necessary, high burden upon participants, longitudinal study impractical, and poor scaling. | |
| Recruited participants | Completing online form. | Development of online form, reminders for participants. | Internet-capable device. | Electronic contact can readily scale. | Can be completed when convenient, ensure standardised reports, and include images etc. Scalable and automatable. | Internet access essential, and relies upon participant commitment. Reliant upon non-specialist reporting of symptoms. | |
| Recruited participants | Sending symptom reports and learning necessary syntax for reports. | Managing text message gateway, message processing, and training participants. | Mobile phone and text message gateway. | Electronic contact can readily scale. | Mobile phone access widespread. Can be sent when convenient for participants. Scalable, and automatable. | Reliance upon participant commitment and correct formatting without aid. Mobile access essential, and non-specialist reporting of symptoms. | |
| Individuals using sentinel pharmacies | None | Collation of records/reports. | Electronic sales records. | Good if records standardised and automatically uploaded. Otherwise poor. | Large sampling pool. Minimal sampling effort. | Medication possibly poor proxy to disease incidence—purchasing behaviour not always be directly related to current illness. | |
| Population of monitored institutions | None | Collation of records/reports. | Electronic absence records. | Good if records standardised and automatically uploaded. Otherwise poor. | Large sampling pool. Minimal sampling effort. | Selected institutions may be poor representations of disease patterns in the wider population, typically shallow disease information. | |
| Visitors to sentinel healthcare centres | None | Collation of records/reports. | Electronic medical reports. | Good if records standardised and automatically uploaded. Otherwise poor. | Reliable and detailed reports. Relatively little sampling effort. | Bias towards serious illness. Appointments may focus upon a single ailment. | |
| Social media using population | None | Development of appropriate message filtering and analysis algorithms. | Internet-capable device. | Good if filtering criteria and algorithms remain suitable. | Large sampling pool, relatively little sampling effort, potential geolocation. | Messages not intended for disease surveillance—filtering essential. Low report clarity expected. |
Fig 1Sample of symptom codes, and pictogram explaining report structure.
Depicted are a small subset of symptom codes, which includes febrile and gastrointestinal symptoms alongside some of the respiratory symptoms. Message structure consisted of alphabetical symptom codes, the number of days sick, and the number of other household members with the same illness. The first of these report elements is for the reporting of any current illness, number of days sick is intended to facilitate the distinction of different ‘bouts’ of illness, and the reporting of other household members sick with the same illness provides both an indication of household-clustering of illness, and allows for the testing of report consistency between household members.
Fig 2Overview of participant reporting behaviour.
Basic breakdown of message formatting at each timestep, with total percentage correct at the base of each bar.
Examples of syntax errors in text message reports, where ‘?’ indicates a missing report element, and ‘NA’ an unneeded report element.
Note ‘problem with identifier and days’ not included, due to no examples of this occuring.
| Error type | Original text | Identifier | Symptoms | Days sick | Others sick |
|---|---|---|---|---|---|
| Correctly formatted | H,i+3w+1o | NA | H,I | 3 | 1 |
| Problem with identifier | X,o 2d | ? | X | NA | NA |
| Problem with days sick | 2+A,D,F,M,N,S+4O | 2 | A,D,F,M,N,S | ? | 4 |
| Problem with others sick | F,K,R+3d | NA | F,K,R | 3 | ? |
| Problem with days and others sick | V+2d. | NA | V | 2 | ? |
| Problem with identifier and others sick | 2+F | 2 | F | ? | ? |
| Problem with identifier, days and others sick | C | ? | C | ? | ? |
Fig 3Household-level reporting behaviour.
Categorisation of households based upon message-sending behaviour. For each 3-day reporting timeslot, the overall proportions of different reporting behaviours (3a) and the reporting behaviour of each household (3b).
Fig 4Household-level reporting consistency.
Descriptive statistics pertaining to household responsiveness. Consecutive reporting is determined on the basis of receiving at least one report at the household-level, correct or incorrect (4a). Also considered is the relationship between overall reporting consistency and average report accuracy (4b). The statistic used for household-level correctness is derived from the 12 timeslot average of coding household report behaviour as follows: No reports = 1; one report, incorrect = 2; one report, correct = 3; two incorrect = 4; two reports, one incorrect = 5; two reports, correct = 6.
Fig 5Number of mentions of each symptom across all reports, coloured by symptom type (5a).
Frequency of distinct bouts containing at least one mention of a given symptom (5b).
Fig 6Symptom report totals by timeslot.
Mentions of individual symptoms in reports by timeslot(6a), total symptom reports of a given type by timeslot (6b).
Fig 7Between-bout comparisons.
Distributions of bout duration (7a) and the number of others reported to be sick with the same illness (7b) during bouts of illness. Also, comparison of the means of summary statistics obtained by aggregating all bouts containing at least one mention of a given symptom—median bout duration, and mean proportion of others sick (7c). This proportion was calculated using the number of individuals living in the household, which was recorded as part of the consent/assent process, and the distribution of which can be seen in S2 Fig.