Literature DB >> 27265309

High-throughput screening in the C. elegans nervous system.

Holly E Kinser1, Zachary Pincus2.   

Abstract

The nematode Caenorhabditis elegans is widely used as a model organism in the field of neurobiology. The wiring of the C. elegans nervous system has been entirely mapped, and the animal's optical transparency allows for in vivo observation of neuronal activity. The nematode is also small in size, self-fertilizing, and inexpensive to cultivate and maintain, greatly lending to its utility as a whole-animal model for high-throughput screening (HTS) in the nervous system. However, the use of this organism in large-scale screens presents unique technical challenges, including reversible immobilization of the animal, parallel single-animal culture and containment, automation of laser surgery, and high-throughput image acquisition and phenotyping. These obstacles require significant modification of existing techniques and the creation of new C. elegans-based HTS platforms. In this review, we outline these challenges in detail and survey the novel technologies and methods that have been developed to address them.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Caenorhabditis elegans; High-throughput screening; Nervous system; Whole-animal model

Mesh:

Year:  2016        PMID: 27265309      PMCID: PMC5136351          DOI: 10.1016/j.mcn.2016.06.001

Source DB:  PubMed          Journal:  Mol Cell Neurosci        ISSN: 1044-7431            Impact factor:   4.314


  81 in total

1.  Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.

Authors:  Georg Nagel; Martin Brauner; Jana F Liewald; Nona Adeishvili; Ernst Bamberg; Alexander Gottschalk
Journal:  Curr Biol       Date:  2005-12-20       Impact factor: 10.834

2.  Chemosensory neurons with overlapping functions direct chemotaxis to multiple chemicals in C. elegans.

Authors:  C I Bargmann; H R Horvitz
Journal:  Neuron       Date:  1991-11       Impact factor: 17.173

3.  The neural circuit for touch sensitivity in Caenorhabditis elegans.

Authors:  M Chalfie; J E Sulston; J G White; E Southgate; J N Thomson; S Brenner
Journal:  J Neurosci       Date:  1985-04       Impact factor: 6.167

4.  Oxidative stress causes abnormal accumulation of familial amyotrophic lateral sclerosis-related mutant SOD1 in transgenic Caenorhabditis elegans.

Authors:  T Oeda; S Shimohama; N Kitagawa; R Kohno; T Imura; H Shibasaki; N Ishii
Journal:  Hum Mol Genet       Date:  2001-09-15       Impact factor: 6.150

5.  Caenorhabditis elegans MPP+ model of Parkinson's disease for high-throughput drug screenings.

Authors:  Evelyn Braungart; Manfred Gerlach; Peter Riederer; Ralf Baumeister; Marius C Hoener
Journal:  Neurodegener Dis       Date:  2004       Impact factor: 2.977

6.  An automated microfluidic platform for calcium imaging of chemosensory neurons in Caenorhabditis elegans.

Authors:  Trushal Vijaykumar Chokshi; Daphne Bazopoulou; Nikos Chronis
Journal:  Lab Chip       Date:  2010-09-01       Impact factor: 6.799

7.  A novel high throughput assay for anthelmintic drug screening and resistance diagnosis by real-time monitoring of parasite motility.

Authors:  Michael J Smout; Andrew C Kotze; James S McCarthy; Alex Loukas
Journal:  PLoS Negl Trop Dis       Date:  2010-11-16

8.  Automated high-content live animal drug screening using C. elegans expressing the aggregation prone serpin α1-antitrypsin Z.

Authors:  Sager J Gosai; Joon Hyeok Kwak; Cliff J Luke; Olivia S Long; Dale E King; Kevin J Kovatch; Paul A Johnston; Tong Ying Shun; John S Lazo; David H Perlmutter; Gary A Silverman; Stephen C Pak
Journal:  PLoS One       Date:  2010-11-12       Impact factor: 3.240

9.  Agarose Microchambers for Long-term Calcium Imaging of Caenorhabditis elegans.

Authors:  Michal Turek; Judith Besseling; Henrik Bringmann
Journal:  J Vis Exp       Date:  2015-06-24       Impact factor: 1.355

10.  Drug absorption efficiency in Caenorhbditis elegans delivered by different methods.

Authors:  Shan-Qing Zheng; Ai-Jun Ding; Guo-Ping Li; Gui-Sheng Wu; Huai-Rong Luo
Journal:  PLoS One       Date:  2013-02-25       Impact factor: 3.240

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  6 in total

1.  New live screening of plant-nematode interactions in the rhizosphere.

Authors:  Felicity E O'Callaghan; Roberto A Braga; Roy Neilson; Stuart A MacFarlane; Lionel X Dupuy
Journal:  Sci Rep       Date:  2018-01-23       Impact factor: 4.379

2.  Analyzing the locomotory gaitprint of Caenorhabditis elegans on the basis of empirical mode decomposition.

Authors:  Li-Chun Lin; Han-Sheng Chuang
Journal:  PLoS One       Date:  2017-07-24       Impact factor: 3.240

3.  The Detection of Early Epigenetic Inheritance of Mitochondrial Stress in C. Elegans with a Microfluidic Phenotyping Platform.

Authors:  H B Atakan; K S Hof; M Cornaglia; J Auwerx; M A M Gijs
Journal:  Sci Rep       Date:  2019-12-17       Impact factor: 4.379

Review 4.  Drug discovery: Insights from the invertebrate Caenorhabditis elegans.

Authors:  Sebastián Giunti; Natalia Andersen; Diego Rayes; María José De Rosa
Journal:  Pharmacol Res Perspect       Date:  2021-04

5.  A multi-omic analysis of MCF10A cells provides a resource for integrative assessment of ligand-mediated molecular and phenotypic responses.

Authors:  Sean M Gross; Mark A Dane; Rebecca L Smith; Kaylyn L Devlin; Ian C McLean; Daniel S Derrick; Caitlin E Mills; Kartik Subramanian; Alexandra B London; Denis Torre; John Erol Evangelista; Daniel J B Clarke; Zhuorui Xie; Cemal Erdem; Nicholas Lyons; Ted Natoli; Sarah Pessa; Xiaodong Lu; James Mullahoo; Jonathan Li; Miriam Adam; Brook Wassie; Moqing Liu; David F Kilburn; Tiera A Liby; Elmar Bucher; Crystal Sanchez-Aguila; Kenneth Daily; Larsson Omberg; Yunguan Wang; Connor Jacobson; Clarence Yapp; Mirra Chung; Dusica Vidovic; Yiling Lu; Stephan Schurer; Albert Lee; Ajay Pillai; Aravind Subramanian; Malvina Papanastasiou; Ernest Fraenkel; Heidi S Feiler; Gordon B Mills; Jake D Jaffe; Avi Ma'ayan; Marc R Birtwistle; Peter K Sorger; James E Korkola; Joe W Gray; Laura M Heiser
Journal:  Commun Biol       Date:  2022-10-07

Review 6.  Caenorhabditis elegans for rare disease modeling and drug discovery: strategies and strengths.

Authors:  Peter A Kropp; Rosemary Bauer; Isabella Zafra; Carina Graham; Andy Golden
Journal:  Dis Model Mech       Date:  2021-08-09       Impact factor: 5.758

  6 in total

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