Literature DB >> 27259745

Inference of Ancestry in Forensic Analysis II: Analysis of Genetic Data.

Carla Santos1, Chris Phillips2, A Gomez-Tato3, J Alvarez-Dios3, Ángel Carracedo2,4, Maria Victoria Lareu2.   

Abstract

Three approaches applicable to the analysis of forensic ancestry-informative marker data-STRUCTURE, principal component analysis, and the Snipper Bayesian classification system-are reviewed. Detailed step-by-step guidance is provided for adjusting parameter settings in STRUCTURE with particular regard to their effect when differentiating populations. Several enhancements to the Snipper online forensic classification portal are described, highlighting the added functionality they bring to particular aspects of ancestry-informative SNP analysis in a forensic context.

Keywords:  Bayesian methods; Genetic ancestry; PCA; Reference data; SPSmart browser; STRUCTURE; Snipper

Mesh：

Year:  2016        PMID： 27259745     DOI： 10.1007/978-1-4939-3597-0_19

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  7 in total

1.  Multivariate statistical approach and machine learning for the evaluation of biogeographical ancestry inference in the forensic field.

Authors:  Eugenio Alladio; Brando Poggiali; Giulia Cosenza; Elena Pilli
Journal:  Sci Rep       Date:  2022-05-28       Impact factor: 4.996

2.  Unveiling forensically relevant biogeographic, phenotype and Y-chromosome SNP variation in Pakistani ethnic groups using a customized hybridisation enrichment forensic intelligence panel.

Authors:  Sobiah Rauf; Jeremy J Austin; Denice Higgins; Muhammad Ramzan Khan
Journal:  PLoS One       Date:  2022-02-17       Impact factor: 3.240

3.  Development and Performance Evaluation of a Novel Ancestry Informative DIP Panel for Continental Origin Inference.

Authors:  Yongsong Zhou; Xiaoye Jin; Buling Wu; Bofeng Zhu
Journal:  Front Genet       Date:  2022-02-17       Impact factor: 4.599

4.  Ancestry Prediction Comparisons of Different AISNPs for Five Continental Populations and Population Structure Dissection of the Xinjiang Hui Group via a Self-Developed Panel.

Authors:  Xiao-Ye Jin; Yu-Xin Guo; Chong Chen; Wei Cui; Yan-Fang Liu; Yun-Chun Tai; Bo-Feng Zhu
Journal:  Genes (Basel)       Date:  2020-05-04       Impact factor: 4.096

Review 5.  Review of the Forensic Applicability of Biostatistical Methods for Inferring Ancestry from Autosomal Genetic Markers.

Authors:  Torben Tvedebrink
Journal:  Genes (Basel)       Date:  2022-01-14       Impact factor: 4.096

6.  The FORCE Panel: An All-in-One SNP Marker Set for Confirming Investigative Genetic Genealogy Leads and for General Forensic Applications.

Authors:  Andreas Tillmar; Kimberly Sturk-Andreaggi; Jennifer Daniels-Higginbotham; Jacqueline Tyler Thomas; Charla Marshall
Journal:  Genes (Basel)       Date:  2021-12-10       Impact factor: 4.096

7.  HSD17B7 gene in self-renewal and oncogenicity of keratinocytes from Black versus White populations.

Authors:  Xiaoying Xu; Beatrice Tassone; Paola Ostano; Atul Katarkar; Tatiana Proust; Jean-Marc Joseph; Chiara Riganti; Giovanna Chiorino; Zoltan Kutalik; Karine Lefort; Gian Paolo Dotto
Journal:  EMBO Mol Med       Date:  2021-06-29       Impact factor: 12.137
  7 in total

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