Literature DB >> 27259556

Flavisolibacter tropicus sp. nov., isolated from tropical soil.

Jae-Jin Lee1, Myung-Suk Kang2, Gyung Soon Kim3, Chang Soek Lee4, Sangyong Lim5, Jidam Lee6, Si Hyeon Roh6, Hyerin Kang6, Jung Min Ha6, Sojung Bae6, Hee-Young Jung1, Myung Kyum Kim4.   

Abstract

A Gram-stain-negative, non-motile, deep yellow, rod-shaped bacterium, designated strain LCS9T, was isolated from a soil sample at the tropical zone within the Ecorium of the National Institute of Ecology in Seocheon, central-western Korea. 16S rRNA gene sequence analysis showed that strain LCS9T clustered with members of the genus Flavisolibacter of the family Chitinophagaceae, phylum Bacteroidetes. Sequence similarities between strain LCS9T and the type strains of the genus Flavisolibacter ranged from 94.6 to 94.9 %. Strain LCS9T grew at 10-37 °C (optimum, 25 °C) and at pH 6.0-10.0 (optimum, pH 7); was positive for catalase and oxidase; and negative for nitrate reduction and production of indole. Cells showed pigment absorbance peaks at 451 and 479 nm, and had 0.03 % survival following exposure to 3 kGy gamma radiation. Strain LCS9T had the following chemotaxonomic characteristics: the major quinone was menaquinone-7 (MK-7); the major fatty acids were iso-C15 : 0 and iso-C17 : 0 3-OH; polar lipids included phosphoatidylethanolamine, an unidentified aminophospholipid, unidentified aminolipidsand unidentified lipids. The DNA G+C content was 39.4 mol%. Based on polyphasic analysis, the type strain LCS9T (=KCTC 42070T=JCM 19972T) represents a novel species for which the name Flavisolibacter tropicus sp. nov. is proposed. Radiation resistance in the genus Flavisolibacter has not been reported to date, and so this is the first report of low-level radiation resistance of a member of the genus.

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Year:  2016        PMID: 27259556     DOI: 10.1099/ijsem.0.001207

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

2.  The Characterization of Microbiome and Interactions on Weathered Rocks in a Subsurface Karst Cave, Central China.

Authors:  Yiheng Wang; Xiaoyu Cheng; Hongmei Wang; Jianping Zhou; Xiaoyan Liu; Olli H Tuovinen
Journal:  Front Microbiol       Date:  2022-06-29       Impact factor: 6.064

3.  Flavisolibacter aluminii sp. nov., a novel member of the genus Flavisolibacter isolated from an automotive air conditioning system.

Authors:  Hyosun Lee; Dong-Uk Kim; Suyeon Lee; Song-Gun Kim; A-Young Park; Jae-Hyung Ahn; Jong-Ok Ka
Journal:  J Microbiol       Date:  2018-11-19       Impact factor: 3.422

  3 in total

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