Literature DB >> 27243272

Kekule.js: An Open Source JavaScript Chemoinformatics Toolkit.

Chen Jiang1, Xi Jin1, Ying Dong1, Ming Chen1.   

Abstract

Kekule.js is an open-source, object-oriented JavaScript toolkit for chemoinformatics. It provides methods for many common tasks in molecular informatics, including chemical data input/output (I/O), two- and three-dimensional (2D/3D) rendering of chemical structure, stereo identification, ring perception, structure comparison, and substructure search. Encapsulated widgets to display and edit chemical structures directly in web context are also supplied. Developed with web standards, the toolkit is ideal for building chemoinformatics applications over the Internet. Moreover, it is highly platform-independent and can also be used in desktop or mobile environments. Some initial applications, such as plugins for inputting chemical structures on the web and uses in chemistry education, have been developed based on the toolkit.

Mesh:

Year:  2016        PMID: 27243272     DOI: 10.1021/acs.jcim.6b00167

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  9 in total

Review 1.  Using ChEMBL web services for building applications and data processing workflows relevant to drug discovery.

Authors:  Michał M Nowotka; Anna Gaulton; David Mendez; A Patricia Bento; Anne Hersey; Andrew Leach
Journal:  Expert Opin Drug Discov       Date:  2017-06-12       Impact factor: 6.098

2.  cheML.io: an online database of ML-generated molecules.

Authors:  Rustam Zhumagambetov; Daniyar Kazbek; Mansur Shakipov; Daulet Maksut; Vsevolod A Peshkov; Siamac Fazli
Journal:  RSC Adv       Date:  2020-12-22       Impact factor: 4.036

3.  ezCADD: A Rapid 2D/3D Visualization-Enabled Web Modeling Environment for Democratizing Computer-Aided Drug Design.

Authors:  Aoxiang Tao; Yuying Huang; Yasuhiro Shinohara; Matthew L Caylor; Srinath Pashikanti; Dong Xu
Journal:  J Chem Inf Model       Date:  2018-11-16       Impact factor: 4.956

Review 4.  Programming languages in chemistry: a review of HTML5/JavaScript.

Authors:  Kevin J Theisen
Journal:  J Cheminform       Date:  2019-02-05       Impact factor: 5.514

5.  3DStructGen: an interactive web-based 3D structure generation for non-periodic molecule and crystal.

Authors:  Pin Chen; Yu Wang; Hui Yan; Sen Gao; Zexin Xu; Yangzhong Li; Qing Mo; Junkang Huang; Jun Tao; GeChuanqi Pan; Jiahui Li; Yunfei Du
Journal:  J Cheminform       Date:  2020-01-23       Impact factor: 5.514

6.  DDPD 1.0: a manually curated and standardized database of digital properties of approved drugs for drug-likeness evaluation and drug development.

Authors:  Qiang Li; Shiyong Ma; Xuelu Zhang; Zhaoyu Zhai; Lu Zhou; Haodong Tao; Yachen Wang; Jianbo Pan
Journal:  Database (Oxford)       Date:  2022-02-09       Impact factor: 4.462

Review 7.  Open-Source Browser-Based Tools for Structure-Based Computer-Aided Drug Discovery.

Authors:  Ann Wang; Jacob D Durrant
Journal:  Molecules       Date:  2022-07-20       Impact factor: 4.927

8.  Twitter integration of chemistry software tools.

Authors:  Naruki Yoshikawa; Ryuichi Kubo; Kazuki Z Yamamoto
Journal:  J Cheminform       Date:  2021-07-02       Impact factor: 5.514

9.  Comprehensive Analysis of Chemical Structures That Have Been Tested as CFTR Activating Substances in a Publicly Available Database CandActCFTR.

Authors:  Manuel Manfred Nietert; Liza Vinhoven; Florian Auer; Sylvia Hafkemeyer; Frauke Stanke
Journal:  Front Pharmacol       Date:  2021-12-08       Impact factor: 5.810

  9 in total

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