Literature DB >> 27241753

TRICK: A Single-Molecule Method for Imaging the First Round of Translation in Living Cells and Animals.

J M Halstead1, J H Wilbertz2, F Wippich3, T Lionnet4, A Ephrussi3, J A Chao5.   

Abstract

The life of an mRNA is dynamic within a cell. The development of quantitative fluorescent microscopy techniques to image single molecules of RNA has allowed many aspects of the mRNA lifecycle to be directly observed in living cells. Recent advances in live-cell multicolor RNA imaging, however, have now made it possible to investigate RNA metabolism in greater detail. In this chapter, we present an overview of the design and implementation of the translating RNA imaging by coat protein knockoff RNA biosensor, which allows untranslated mRNAs to be distinguished from ones that have undergone a round of translation. The methods required for establishing this system in mammalian cell lines and Drosophila melanogaster oocytes are described here, but the principles may be applied to any experimental system.
© 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Fluorescence microscopy; Live-cell imaging; RNA imaging; Single-particle tracking; Translation

Mesh:

Substances:

Year:  2016        PMID: 27241753     DOI: 10.1016/bs.mie.2016.02.027

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  7 in total

1.  Quantitative Immunofluorescence to Measure Global Localized Translation.

Authors:  Jonathan Bergeman; Marc-Étienne Huot
Journal:  J Vis Exp       Date:  2017-08-22       Impact factor: 1.355

Review 2.  Following the messenger: Recent innovations in live cell single molecule fluorescence imaging.

Authors:  Andreas Schmidt; Guoming Gao; Saffron R Little; Ameya P Jalihal; Nils G Walter
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-01-28       Impact factor: 9.957

Review 3.  It's Just a Phase: Exploring the Relationship Between mRNA, Biomolecular Condensates, and Translational Control.

Authors:  Dylan M Parker; Lindsay P Winkenbach; Erin Osborne Nishimura
Journal:  Front Genet       Date:  2022-06-27       Impact factor: 4.772

4.  Slam protein dictates subcellular localization and translation of its own mRNA.

Authors:  Shuling Yan; Sreemukta Acharya; Stephanie Gröning; Jörg Großhans
Journal:  PLoS Biol       Date:  2017-12-04       Impact factor: 8.029

5.  What determines eukaryotic translation elongation: recent molecular and quantitative analyses of protein synthesis.

Authors:  Nagammal Neelagandan; Irene Lamberti; Hugo J F Carvalho; Cédric Gobet; Felix Naef
Journal:  Open Biol       Date:  2020-12-09       Impact factor: 6.411

Review 6.  Subcellular Transcriptomics and Proteomics: A Comparative Methods Review.

Authors:  Josie A Christopher; Aikaterini Geladaki; Charlotte S Dawson; Owen L Vennard; Kathryn S Lilley
Journal:  Mol Cell Proteomics       Date:  2021-12-16       Impact factor: 5.911

Review 7.  Flying the RNA Nest: Drosophila Reveals Novel Insights into the Transcriptome Dynamics of Early Development.

Authors:  Fabio Alexis Lefebvre; Éric Lécuyer
Journal:  J Dev Biol       Date:  2018-03-07
  7 in total

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