Literature DB >> 27241221

Development and Application of Functionalized Protein Binders in Multicellular Organisms.

D Bieli1, I Alborelli1, S Harmansa1, S Matsuda1, E Caussinus2, M Affolter3.   

Abstract

Protein-protein interactions are crucial for almost all biological processes. Studying such interactions in their native environment is critical but not easy to perform. Recently developed genetically encoded protein binders were shown to function inside living cells. These molecules offer a new, direct way to assess protein function, distribution and dynamics in vivo. A widely used protein binder scaffold are the so-called nanobodies, which are derived from the variable domain of camelid heavy-chain antibodies. Another commonly used scaffold, the DARPins, is based on Ankyrin repeats. In this review, we highlight how these binders can be functionalized in order to study proteins in vivo during the development of multicellular organisms. It is to be anticipated that many more applications for such synthetic protein binders will be developed in the near future.
Copyright © 2016 Elsevier Inc. All rights reserved.

Keywords:  DARPins; Drosophila; mouse; nanobodies; protein manipulation; zebrafish

Mesh:

Substances:

Year:  2016        PMID: 27241221     DOI: 10.1016/bs.ircmb.2016.02.006

Source DB:  PubMed          Journal:  Int Rev Cell Mol Biol        ISSN: 1937-6448            Impact factor:   6.813


  10 in total

1.  A versatile nanobody-based toolkit to analyze retrograde transport from the cell surface.

Authors:  Dominik P Buser; Kai D Schleicher; Cristina Prescianotto-Baschong; Martin Spiess
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-18       Impact factor: 11.205

2.  LlamaTags: A Versatile Tool to Image Transcription Factor Dynamics in Live Embryos.

Authors:  Jacques P Bothma; Matthew R Norstad; Simon Alamos; Hernan G Garcia
Journal:  Cell       Date:  2018-05-10       Impact factor: 41.582

3.  A nanobody-based toolset to investigate the role of protein localization and dispersal in Drosophila.

Authors:  Stefan Harmansa; Ilaria Alborelli; Dimitri Bieli; Emmanuel Caussinus; Markus Affolter
Journal:  Elife       Date:  2017-04-11       Impact factor: 8.140

4.  DARPins recognizing mTFP1 as novel reagents for in vitro and in vivo protein manipulations.

Authors:  M Alessandra Vigano; Dimitri Bieli; Jonas V Schaefer; Roman P Jakob; Shinya Matsuda; Timm Maier; Andreas Plückthun; Markus Affolter
Journal:  Biol Open       Date:  2018-10-29       Impact factor: 2.422

Review 5.  Reflections on the use of protein binders to study protein function in developmental biology.

Authors:  Gustavo Aguilar; M Alessandra Vigano; Markus Affolter; Shinya Matsuda
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2019-07-02       Impact factor: 5.814

6.  Protein manipulation using single copies of short peptide tags in cultured cells and in Drosophila melanogaster.

Authors:  M Alessandra Vigano; Clara-Maria Ell; Manuela M M Kustermann; Gustavo Aguilar; Shinya Matsuda; Ning Zhao; Timothy J Stasevich; Markus Affolter; George Pyrowolakis
Journal:  Development       Date:  2021-03-16       Impact factor: 6.868

7.  Asymmetric requirement of Dpp/BMP morphogen dispersal in the Drosophila wing disc.

Authors:  Shinya Matsuda; Jonas V Schaefer; Yusuke Mii; Yutaro Hori; Dimitri Bieli; Masanori Taira; Andreas Plückthun; Markus Affolter
Journal:  Nat Commun       Date:  2021-11-08       Impact factor: 14.919

8.  Engineered kinases as a tool for phosphorylation of selected targets in vivo.

Authors:  Katarzyna Lepeta; Chantal Roubinet; Milena Bauer; M Alessandra Vigano; Gustavo Aguilar; Oguz Kanca; Amanda Ochoa-Espinosa; Dimitri Bieli; Clemens Cabernard; Emmanuel Caussinus; Markus Affolter
Journal:  J Cell Biol       Date:  2022-09-14       Impact factor: 8.077

Review 9.  Gene Tagging Strategies To Assess Protein Expression, Localization, and Function in Drosophila.

Authors:  Oguz Kanca; Hugo J Bellen; Frank Schnorrer
Journal:  Genetics       Date:  2017-10       Impact factor: 4.562

10.  Dpp from the anterior stripe of cells is crucial for the growth of the Drosophila wing disc.

Authors:  Shinya Matsuda; Markus Affolter
Journal:  Elife       Date:  2017-07-04       Impact factor: 8.140

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.