Literature DB >> 27241043

Bacterial GWAS: not just gilding the lily.

John A Lees1, Stephen D Bentley1.   

Abstract

Mesh：

Year:  2016        PMID： 27241043     DOI： 10.1038/nrmicro.2016.82

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN： 1740-1526            Impact factor:   60.633


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  3 in total

1.  Identifying lineage effects when controlling for population structure improves power in bacterial association studies.

Authors:  Sarah G Earle; Chieh-Hsi Wu; Jane Charlesworth; Nicole Stoesser; N Claire Gordon; Timothy M Walker; Chris C A Spencer; Zamin Iqbal; David A Clifton; Katie L Hopkins; Neil Woodford; E Grace Smith; Nazir Ismail; Martin J Llewelyn; Tim E Peto; Derrick W Crook; Gil McVean; A Sarah Walker; Daniel J Wilson
Journal:  Nat Microbiol       Date:  2016-04-04       Impact factor: 17.745

2.  Genomic and functional analyses of Mycobacterium tuberculosis strains implicate ald in D-cycloserine resistance.

Authors:  Christopher A Desjardins; Keira A Cohen; Vanisha Munsamy; Thomas Abeel; Kashmeel Maharaj; Bruce J Walker; Terrance P Shea; Deepak V Almeida; Abigail L Manson; Alex Salazar; Nesri Padayatchi; Max R O'Donnell; Koleka P Mlisana; Jennifer Wortman; Bruce W Birren; Jacques Grosset; Ashlee M Earl; Alexander S Pym
Journal:  Nat Genet       Date:  2016-04-11       Impact factor: 38.330

3.  Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity.

Authors:  Mylène M Maury; Yu-Huan Tsai; Caroline Charlier; Marie Touchon; Viviane Chenal-Francisque; Alexandre Leclercq; Alexis Criscuolo; Charlotte Gaultier; Sophie Roussel; Anne Brisabois; Olivier Disson; Eduardo P C Rocha; Sylvain Brisse; Marc Lecuit
Journal:  Nat Genet       Date:  2016-02-01       Impact factor: 38.330
  3 in total
  6 in total

Review 1.  Population Biology and Comparative Genomics of Campylobacter Species.

Authors:  Lennard Epping; Esther-Maria Antão; Torsten Semmler
Journal:  Curr Top Microbiol Immunol       Date:  2021       Impact factor: 4.291

2.  First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts.

Authors:  Arnaud Felten; Meryl Vila Nova; Kevin Durimel; Laurent Guillier; Michel-Yves Mistou; Nicolas Radomski
Journal:  BMC Microbiol       Date:  2017-11-28       Impact factor: 3.605

3.  A biochemically-interpretable machine learning classifier for microbial GWAS.

Authors:  Erol S Kavvas; Laurence Yang; Jonathan M Monk; David Heckmann; Bernhard O Palsson
Journal:  Nat Commun       Date:  2020-05-22       Impact factor: 14.919

4.  Genetic and metabolic signatures of Salmonella enterica subsp. enterica associated with animal sources at the pangenomic scale.

Authors:  Meryl Vila Nova; Kévin Durimel; Kévin La; Arnaud Felten; Philippe Bessières; Michel-Yves Mistou; Mahendra Mariadassou; Nicolas Radomski
Journal:  BMC Genomics       Date:  2019-11-06       Impact factor: 3.969

5.  A genome-wide association study of the occurrence of genetic variations in Edwardsiella piscicida, Vibrio harveyi, and Streptococcus parauberis under stressed environments.

Authors:  HyeongJin Roh
Journal:  J Fish Dis       Date:  2022-06-23       Impact factor: 2.580

6.  Genome-Wide Association Analyses in the Model Rhizobium Ensifer meliloti.

Authors:  Brendan Epstein; Reda A I Abou-Shanab; Abdelaal Shamseldin; Margaret R Taylor; Joseph Guhlin; Liana T Burghardt; Matthew Nelson; Michael J Sadowsky; Peter Tiffin
Journal:  mSphere       Date:  2018-10-24       Impact factor: 4.389
  6 in total

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