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Literature DB >> 27239556

The Protégé Project: A Look Back and a Look Forward.

Mark A Musen¹.
1. Stanford University.

Abstract

Entities: Chemical Disease Species

Year: 2015 PMID： 27239556 PMCID： PMC4883684 DOI： 10.1145/2757001.2757003

Source DB: PubMed Journal: AI Matters ISSN： 2372-3483

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8 in total

1. Creating mappings for ontologies in biomedicine: simple methods work.

Authors: Amir Ghazvinian; Natalya F Noy; Mark A Musen
Journal: AMIA Annu Symp Proc Date: 2009-11-14

2. EON: a component-based approach to automation of protocol-directed therapy.

Authors: M A Musen; S W Tu; A K Das; Y Shahar
Journal: J Am Med Inform Assoc Date: 1996 Nov-Dec Impact factor: 4.497

3. Representing the NCI Thesaurus in OWL DL: Modeling tools help modeling languages.

Authors: Natalya F Noy; Sherri de Coronado; Harold Solbrig; Gilberto Fragoso; Frank W Hartel; Mark A Musen
Journal: Appl Ontol Date: 2008-01-01 Impact factor: 1.115

4. Knowledge acquisition for temporal abstraction.

Authors: A Stein; M A Musen; Y Shahar
Journal: Proc AMIA Annu Fall Symp Date: 1996

5. Using the wisdom of the crowds to find critical errors in biomedical ontologies: a study of SNOMED CT.

Authors: Jonathan M Mortensen; Evan P Minty; Michael Januszyk; Timothy E Sweeney; Alan L Rector; Natalya F Noy; Mark A Musen
Journal: J Am Med Inform Assoc Date: 2014-10-23 Impact factor: 4.497

6. Databases fight funding cuts.

Authors: Monya Baker
Journal: Nature Date: 2012-09-06 Impact factor: 49.962

7. How Ontologies are Made: Studying the Hidden Social Dynamics Behind Collaborative Ontology Engineering Projects.

Authors: Markus Strohmaier; Simon Walk; Jan Pöschko; Daniel Lamprecht; Tania Tudorache; Csongor Nyulas; Mark A Musen; Natalya F Noy
Journal: Web Semant Date: 2013-05 Impact factor: 1.897

8. The Ontology for Parasite Lifecycle (OPL): towards a consistent vocabulary of lifecycle stages in parasitic organisms.

Authors: Priti P Parikh; Jie Zheng; Flora Logan-Klumpler; Christian J Stoeckert; Christos Louis; Pantelis Topalis; Anna V Protasio; Amit P Sheth; Mark Carrington; Matthew Berriman; Satya S Sahoo
Journal: J Biomed Semantics Date: 2012-05-23

8 in total

93 in total

1. FOBI: an ontology to represent food intake data and associate it with metabolomic data.

Authors: Pol Castellano-Escuder; Raúl González-Domínguez; David S Wishart; Cristina Andrés-Lacueva; Alex Sánchez-Pla
Journal: Database (Oxford) Date: 2020-01-01 Impact factor: 3.451

2. Ontology-Based Interactive Visualization of Patient-Generated Research Questions.

Authors: David Borland; Laura Christopherson; Charles Schmitt
Journal: Appl Clin Inform Date: 2019-06-05 Impact factor: 2.342

3. Shared Decision-Making Ontology for a Healthcare Team Executing a Workflow, an Instantiation for Metastatic Spinal Cord Compression Management.

Authors: Enea Parimbelli; Szymon Wilk; Stephen Kingwell; Pavel Andreev; Wojtek Michalowski
Journal: AMIA Annu Symp Proc Date: 2018-12-05

The Protégé Project: A Look Back and a Look Forward.

1. Creating mappings for ontologies in biomedicine: simple methods work.

2. EON: a component-based approach to automation of protocol-directed therapy.

3. Representing the NCI Thesaurus in OWL DL: Modeling tools help modeling languages.

4. Knowledge acquisition for temporal abstraction.

5. Using the wisdom of the crowds to find critical errors in biomedical ontologies: a study of SNOMED CT.

6. Databases fight funding cuts.

7. How Ontologies are Made: Studying the Hidden Social Dynamics Behind Collaborative Ontology Engineering Projects.

8. The Ontology for Parasite Lifecycle (OPL): towards a consistent vocabulary of lifecycle stages in parasitic organisms.

1. FOBI: an ontology to represent food intake data and associate it with metabolomic data.

2. Ontology-Based Interactive Visualization of Patient-Generated Research Questions.

3. Shared Decision-Making Ontology for a Healthcare Team Executing a Workflow, an Instantiation for Metastatic Spinal Cord Compression Management.

4. How Sustainable are Biomedical Ontologies?

5. MCO: towards an ontology and unified vocabulary for a framework-based annotation of microbial growth conditions.

6. Computerized Approach to Creating a Systematic Ontology of Hematology/Oncology Regimens.

7. Defining Acupuncture-Moxibustion: A Delphi Study Protocol.

8. Development of the Gender, Sex, and Sexual Orientation ontology: Evaluation and workflow.

9. A unified software framework for deriving, visualizing, and exploring abstraction networks for ontologies.

Review 10. Clinical information extraction applications: A literature review.