Literature DB >> 27234361

Molecular Docking and Molecular Dynamics Studies to Identify Potential OXA-10 Extended Spectrum β-Lactamase Non-hydrolysing Inhibitors for Pseudomonas aeruginosa.

Kullappan Malathi1, Sudha Ramaiah2.   

Abstract

Pseudomonas aeruginosa (P. aeruginosa) is an opportunistic bacterium that frequently causes nosocomial infections. New generation cephalosporins and β-lactams along with inhibitors are used for the treatment of opportunistic bacterial infections. The indiscriminate use of antibiotics has led to the emergence of bacterial resistance. Carbapenem class of antibiotics like imipenem and meropenem are currently the final line of antibiotics for the treatment of infections caused by multidrug-resistant P. aeruginosa. Recent reports indicate that P. aeruginosa has acquired resistance to imipenem through a class D oxacillinase-OXA-10 extended spectrum β-lactamase (ESBL). OXA-10 ESBL is encoded by the gene blaOXA-10. There is an urgent need to develop OXA-10 ESBL non-hydrolysing inhibitors. We have attempted to locate OXA-10 ESBL inhibitors by performing molecular docking and molecular dynamics studies on OXA-10 ESBL with imipenem analogues from ZINC database as well as employing imipenem to understand the mechanism of resistance at the structural level. Our in-silico analysis of imipenem analogues reveals that ZINC44672480 has ideal characteristics for a potent OXA-10 ESBL non-hydrolysing inhibitor. We believe that the results from our study will provide valuable insights into the mechanism of drug resistance and aid in designing potent inhibitors against OXA-10 ESBL producing P. aeruginosa.

Entities:  

Keywords:  Analogues; Drug-likeness; Resistance; Toxicity; β-Lactamase

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Year:  2016        PMID: 27234361     DOI: 10.1007/s12013-016-0735-8

Source DB:  PubMed          Journal:  Cell Biochem Biophys        ISSN: 1085-9195            Impact factor:   2.194


  2 in total

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Authors:  Natasha L Maia; Mariana de Barros; Leandro L de Oliveira; Silvia A Cardoso; Marcelo H Dos Santos; Fabio A Pieri; Teodorico C Ramalho; Elaine F F da Cunha; Maria A S Moreira
Journal:  Front Microbiol       Date:  2018-06-06       Impact factor: 5.640

2.  Datasets comprising the quality validations of simulated protein-ligand complexes and SYBYL docking scores of bioactive natural compounds as inhibitors of Mycobacterium tuberculosis protein-targets.

Authors:  Sravan Kumar Miryala; Soumya Basu; Aniket Naha; Reetika Debroy; Sudha Ramaiah; Anand Anbarasu; Saravanan Natarajan
Journal:  Data Brief       Date:  2022-04-10
  2 in total

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