Literature DB >> 27233649

Association of a TDRD1 variant with spermatogenic failure susceptibility in the Han Chinese.

Xiao-Bin Zhu1, Jian-Qi Lu2, Er-Lei Zhi3, Yong Zhu1, Sha-Sha Zou1, Zi-Jue Zhu3, Feng Zhang2, Zheng Li4.   

Abstract

PURPOSE: Piwi-interacting RNAs (piRNAs) are a broad group of noncoding small RNAs that have important biological functions in germline cells and can maintain genome integrity via silencing of retrotransposons. In this study, we aimed to explore the associations between genetic variants of important genes involved in piRNA biogenesis and male infertility with spermatogenic impairment.
METHODS: To this end, five single-nucleotide polymorphisms (SNPs) in the ASZ1, PIWIL1, TDRD1, and TDRD9 genes were genotyped by TaqMan allelic discrimination assays in 342 cases of nonobstructive azoospermia (NOA) and 493 controls.
RESULTS: The SNP rs77559927 in TDRD1 was associated with a reduced risk of spermatogenic impairment. The genotypes TC and TC + CC showed odds ratios and 95 % confidence intervals of 0.73 (0.55-0.98, P = 0.034) and 0.73 (0.56-0.97, P = 0.030), respectively, in patients with NOA compared with those in the controls.
CONCLUSION: Thus, our results provided the first epidemiological evidence supporting the involvement of TDRD1 genetic polymorphisms in piRNA processing genes in determining the risk of spermatogenic impairment in a Han Chinese population.

Entities:  

Keywords:  Nonobstructive azoospermia; Piwi-interacting RNA; Polymorphism; Spermatogenesis impairment; TDRD1

Mesh:

Substances:

Year:  2016        PMID: 27233649      PMCID: PMC4974230          DOI: 10.1007/s10815-016-0738-9

Source DB:  PubMed          Journal:  J Assist Reprod Genet        ISSN: 1058-0468            Impact factor:   3.412


  37 in total

1.  The small RNA profile during Drosophila melanogaster development.

Authors:  Alexei A Aravin; Mariana Lagos-Quintana; Abdullah Yalcin; Mihaela Zavolan; Debora Marks; Ben Snyder; Terry Gaasterland; Jutta Meyer; Thomas Tuschl
Journal:  Dev Cell       Date:  2003-08       Impact factor: 12.270

Review 2.  MOV10L1 in piRNA processing and gene silencing of retrotransposons during spermatogenesis.

Authors:  Xiaobin Zhu; Erlei Zhi; Zheng Li
Journal:  Reproduction       Date:  2015-02-09       Impact factor: 3.906

Review 3.  Infertility caused by polymorphisms or mutations in spermatogenesis-specific genes.

Authors:  Yoshitake Nishimune; Hiromitsu Tanaka
Journal:  J Androl       Date:  2006-02-10

Review 4.  Male infertility and the genetics of spermatogenesis.

Authors:  M Okabe; M Ikawa; J Ashkenas
Journal:  Am J Hum Genet       Date:  1998-06       Impact factor: 11.025

Review 5.  Genetic causes of spermatogenic failure.

Authors:  Annelien Massart; Willy Lissens; Herman Tournaye; Katrien Stouffs
Journal:  Asian J Androl       Date:  2011-12-05       Impact factor: 3.285

6.  Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila.

Authors:  Kuniaki Saito; Hirotsugu Ishizu; Miharu Komai; Hazuki Kotani; Yoshinori Kawamura; Kazumichi M Nishida; Haruhiko Siomi; Mikiko C Siomi
Journal:  Genes Dev       Date:  2010-10-21       Impact factor: 11.361

7.  DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Authors:  Satomi Kuramochi-Miyagawa; Toshiaki Watanabe; Kengo Gotoh; Yasushi Totoki; Atsushi Toyoda; Masahito Ikawa; Noriko Asada; Kanako Kojima; Yuka Yamaguchi; Takashi W Ijiri; Kenichiro Hata; En Li; Yoichi Matsuda; Tohru Kimura; Masaru Okabe; Yoshiyuki Sakaki; Hiroyuki Sasaki; Toru Nakano
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

8.  The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.

Authors:  Masanobu Shoji; Takashi Tanaka; Mihoko Hosokawa; Michael Reuter; Alexander Stark; Yuzuru Kato; Gen Kondoh; Katsuya Okawa; Takeshi Chujo; Tsutomu Suzuki; Kenichiro Hata; Sandra L Martin; Toshiaki Noce; Satomi Kuramochi-Miyagawa; Toru Nakano; Hiroyuki Sasaki; Ramesh S Pillai; Norio Nakatsuji; Shinichiro Chuma
Journal:  Dev Cell       Date:  2009-12       Impact factor: 12.270

9.  Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi.

Authors:  Chen Chen; Jing Jin; D Andrew James; Melanie A Adams-Cioaba; Jin Gyoon Park; Yahong Guo; Enrico Tenaglia; Chao Xu; Gerald Gish; Jinrong Min; Tony Pawson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-16       Impact factor: 11.205

10.  Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.

Authors:  Julius Brennecke; Alexei A Aravin; Alexander Stark; Monica Dus; Manolis Kellis; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2007-03-08       Impact factor: 41.582

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  4 in total

Review 1.  Single nucleotide polymorphisms in piRNA-pathway genes: an insight into genetic determinants of human diseases.

Authors:  Jyoti Roy; Kalyani Anand; Swati Mohapatra; Rojalin Nayak; Trisha Chattopadhyay; Bibekanand Mallick
Journal:  Mol Genet Genomics       Date:  2019-10-14       Impact factor: 3.291

Review 2.  Emerging roles and functional mechanisms of PIWI-interacting RNAs.

Authors:  Xin Wang; Anne Ramat; Martine Simonelig; Mo-Fang Liu
Journal:  Nat Rev Mol Cell Biol       Date:  2022-09-14       Impact factor: 113.915

3.  Targeted Sequencing Identifies the Genetic Variants Associated with High-altitude Polycythemia in the Tibetan Population.

Authors:  Zhiying Zhang; Lifeng Ma; Xiaowei Fan; Kun Wang; Lijun Liu; Yiduo Zhao; ZhiPeng Zhao; Han Zhang; Tian Liang; Wenxue Dong; Peng Cai; Yansong Li; Jing Li; Songhua Zhou; Longli Kang
Journal:  Indian J Hematol Blood Transfus       Date:  2021-08-03       Impact factor: 0.915

Review 4.  The gene regulatory role of non-coding RNAs in non-obstructive azoospermia.

Authors:  Guanqing Zhou; Mimi Zhang; Jingzhi Zhang; Yaofeng Feng; Zhishen Xie; Siyi Liu; Detu Zhu; Yumei Luo
Journal:  Front Endocrinol (Lausanne)       Date:  2022-08-18       Impact factor: 6.055

  4 in total

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