Literature DB >> 27214610

From Classical to Quantum and Back: A Hamiltonian Scheme for Adaptive Multiresolution Classical/Path-Integral Simulations.

Karsten Kreis1,2, Mark E Tuckerman3,4,5, Davide Donadio1,6, Kurt Kremer1, Raffaello Potestio1.   

Abstract

Quantum delocalization of atomic nuclei affects the physical properties of many hydrogen-rich liquids and biological systems even at room temperature. In computer simulations, quantum nuclei can be modeled via the path-integral formulation of quantum statistical mechanics, which implies a substantial increase in computational overhead. By restricting the quantum description to a small spatial region, this cost can be significantly reduced. Herein, we derive a bottom-up, rigorous, Hamiltonian-based scheme that allows molecules to change from quantum to classical and vice versa on the fly as they diffuse through the system, both reducing overhead and making quantum grand-canonical simulations possible. The method is validated via simulations of low-temperature parahydrogen. Our adaptive resolution approach paves the way to efficient quantum simulations of biomolecules, membranes, and interfaces.

Entities:  

Year:  2016        PMID: 27214610     DOI: 10.1021/acs.jctc.6b00242

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  4 in total

1.  Chloride Ion Transport by the E. coli CLC Cl-/H+ Antiporter: A Combined Quantum-Mechanical and Molecular-Mechanical Study.

Authors:  Chun-Hung Wang; Adam W Duster; Baris O Aydintug; MacKenzie G Zarecki; Hai Lin
Journal:  Front Chem       Date:  2018-03-13       Impact factor: 5.221

Review 2.  Molecular Modeling Investigations of Sorption and Diffusion of Small Molecules in Glassy Polymers.

Authors:  Niki Vergadou; Doros N Theodorou
Journal:  Membranes (Basel)       Date:  2019-08-08

3.  Path Integral Molecular Dynamics of Liquid Water in a Mean-Field Particle Reservoir.

Authors:  Antonios Evangelakis; Sara Panahian Jand; Luigi Delle Site
Journal:  ChemistryOpen       Date:  2022-02-25       Impact factor: 2.630

Review 4.  From adaptive resolution to molecular dynamics of open systems.

Authors:  Robinson Cortes-Huerto; Matej Praprotnik; Kurt Kremer; Luigi Delle Site
Journal:  Eur Phys J B       Date:  2021-09-23       Impact factor: 1.500

  4 in total

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