Literature DB >> 27214238

Streamlined mean field variational Bayes for longitudinal and multilevel data analysis.

Cathy Yuen Yi Lee1, Matt P Wand1.   

Abstract

Streamlined mean field variational Bayes algorithms for efficient fitting and inference in large models for longitudinal and multilevel data analysis are obtained. The number of operations is linear in the number of groups at each level, which represents a two orders of magnitude improvement over the naïve approach. Storage requirements are also lessened considerably. We treat models for the Gaussian and binary response situations. Our algorithms allow the fastest ever approximate Bayesian analyses of arbitrarily large longitudinal and multilevel datasets, with little degradation in accuracy compared with Markov chain Monte Carlo. The modularity of mean field variational Bayes allows relatively simple extension to more complicated scenarios.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  Bayesian computing; Longitudinal data; Matrix decomposition; Multilevel model; Variational approximations

Mesh:

Year:  2016        PMID: 27214238     DOI: 10.1002/bimj.201500007

Source DB:  PubMed          Journal:  Biom J        ISSN: 0323-3847            Impact factor:   2.207


  1 in total

1.  GenoGAM 2.0: scalable and efficient implementation of genome-wide generalized additive models for gigabase-scale genomes.

Authors:  Georg Stricker; Mathilde Galinier; Julien Gagneur
Journal:  BMC Bioinformatics       Date:  2018-06-27       Impact factor: 3.169

  1 in total

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