Literature DB >> 27210596

Why is a proton transformed into a hydride by [NiFe] hydrogenases? An intrinsic reactivity analysis based on conceptual DFT.

Siyao Qiu1, Luis Miguel Azofra2, Douglas R MacFarlane2, Chenghua Sun2.   

Abstract

The hydrogen evolution reaction (HER) catalysed by [NiFe] hydrogenases entails a series of chemical events involving great mechanistic interest. In an attempt to understand and delve into the question about 'Why does nature work in that way?', an in-depth intrinsic reactivity analysis based on conceptual DFT has been carried out focusing on the so-called to step, i.e. our work tries to answer how and why the proton attached to the reactive sulphur atom from one of the exo-cyclic cysteine residues is transformed into a bridging hydride to be shared between the Ni/Fe metals in the active site of [NiFe] hydrogenases, which involves not only H migration, but also a change of the charge state on Ni from Ni(i) to Ni(iii). Our DFT results suggest that the transformation is motivated by spontaneous rearrangements of the electron density, and stabilisation comes from the decrease of both electronic activity and electrophilicity index from Ni.

Entities:  

Year:  2016        PMID: 27210596     DOI: 10.1039/c6cp00948d

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  1 in total

Review 1.  X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.

Authors:  Yulia Ilina; Christian Lorent; Sagie Katz; Jae-Hun Jeoung; Seigo Shima; Marius Horch; Ingo Zebger; Holger Dobbek
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-25       Impact factor: 15.336

  1 in total

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