Literature DB >> 27207310

Validation of White-Matter Lesion Change Detection Methods on a Novel Publicly Available MRI Image Database.

Žiga Lesjak1, Franjo Pernuš2, Boštjan Likar2,3, Žiga Špiclin2,3.   

Abstract

Changes of white-matter lesions (WMLs) are good predictors of the progression of neurodegenerative diseases like multiple sclerosis (MS). Based on longitudinal magnetic resonance (MR) imaging the changes can be monitored, while the need for their accurate and reliable quantification led to the development of several automated MR image analysis methods. However, an objective comparison of the methods is difficult, because publicly unavailable validation datasets with ground truth and different sets of performance metrics were used. In this study, we acquired longitudinal MR datasets of 20 MS patients, in which brain regions were extracted, spatially aligned and intensity normalized. Two expert raters then delineated and jointly revised the WML changes on subtracted baseline and follow-up MR images to obtain ground truth WML segmentations. The main contribution of this paper is an objective, quantitative and systematic evaluation of two unsupervised and one supervised intensity based change detection method on the publicly available datasets with ground truth segmentations, using common pre- and post-processing steps and common evaluation metrics. Besides, different combinations of the two main steps of the studied change detection methods, i.e. dissimilarity map construction and its segmentation, were tested to identify the best performing combination.

Entities:  

Keywords:  Change detection; Image segmentation; Lesion; Magnetic resonance; Multiple sclerosis; Quantitative evaluation; Validation dataset

Mesh:

Year:  2016        PMID: 27207310     DOI: 10.1007/s12021-016-9301-1

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  40 in total

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2.  Evaluating intensity normalization on MRIs of human brain with multiple sclerosis.

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Review 3.  Multiple sclerosis: the role of MR imaging.

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Review 5.  Automated detection of multiple sclerosis lesions in serial brain MRI.

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6.  Brain atrophy and lesion load predict long term disability in multiple sclerosis.

Authors:  Veronica Popescu; Federica Agosta; Hanneke E Hulst; Ingrid C Sluimer; Dirk L Knol; Maria Pia Sormani; Christian Enzinger; Stefan Ropele; Julio Alonso; Jaume Sastre-Garriga; Alex Rovira; Xavier Montalban; Benedetta Bodini; Olga Ciccarelli; Zhaleh Khaleeli; Declan T Chard; Lucy Matthews; Jaqueline Palace; Antonio Giorgio; Nicola De Stefano; Philipp Eisele; Achim Gass; Chris H Polman; Bernard M J Uitdehaag; Maria Jose Messina; Giancarlo Comi; Massimo Filippi; Frederik Barkhof; Hugo Vrenken
Journal:  J Neurol Neurosurg Psychiatry       Date:  2013-03-23       Impact factor: 10.154

7.  Baseline MRI predictors of conversion from MCI to probable AD in the ADNI cohort.

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8.  Automatic change detection in multimodal serial MRI: application to multiple sclerosis lesion evolution.

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9.  Segmentation of subtraction images for the measurement of lesion change in multiple sclerosis.

Authors:  Y Duan; P G Hildenbrand; M P Sampat; D F Tate; I Csapo; B Moraal; R Bakshi; F Barkhof; D S Meier; C R G Guttmann
Journal:  AJNR Am J Neuroradiol       Date:  2008-02       Impact factor: 3.825

10.  Subtraction MR images in a multiple sclerosis multicenter clinical trial setting.

Authors:  Bastiaan Moraal; Dominik S Meier; Peter A Poppe; Jeroen J G Geurts; Hugo Vrenken; William M A Jonker; Dirk L Knol; Ronald A van Schijndel; Petra J W Pouwels; Christoph Pohl; Lars Bauer; Rupert Sandbrink; Charles R G Guttmann; Frederik Barkhof
Journal:  Radiology       Date:  2008-11-26       Impact factor: 11.105

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  6 in total

Review 1.  Recent advances in the longitudinal segmentation of multiple sclerosis lesions on magnetic resonance imaging: a review.

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Review 2.  Machine Learning Approaches in Study of Multiple Sclerosis Disease Through Magnetic Resonance Images.

Authors:  Faezeh Moazami; Alain Lefevre-Utile; Costas Papaloukas; Vassili Soumelis
Journal:  Front Immunol       Date:  2021-08-11       Impact factor: 7.561

3.  Framework to Segment and Evaluate Multiple Sclerosis Lesion in MRI Slices Using VGG-UNet.

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Journal:  Comput Intell Neurosci       Date:  2022-06-02

4.  Fully automated longitudinal segmentation of new or enlarged multiple sclerosis lesions using 3D convolutional neural networks.

Authors:  Julia Krüger; Roland Opfer; Nils Gessert; Ann-Christin Ostwaldt; Praveena Manogaran; Hagen H Kitzler; Alexander Schlaefer; Sven Schippling
Journal:  Neuroimage Clin       Date:  2020-09-24       Impact factor: 4.881

Review 5.  Automatic brain lesion segmentation on standard magnetic resonance images: a scoping review.

Authors:  Emilia Gryska; Justin Schneiderman; Isabella Björkman-Burtscher; Rolf A Heckemann
Journal:  BMJ Open       Date:  2021-01-29       Impact factor: 2.692

6.  New MS lesion segmentation with deep residual attention gate U-Net utilizing 2D slices of 3D MR images.

Authors:  Beytullah Sarica; Dursun Zafer Seker
Journal:  Front Neurosci       Date:  2022-07-22       Impact factor: 5.152

  6 in total

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