Literature DB >> 27207283

Analysis of Liver Connexin Expression Using Reverse Transcription Quantitative Real-Time Polymerase Chain Reaction.

Michaël Maes1, Joost Willebrords2, Sara Crespo Yanguas2, Bruno Cogliati3, Mathieu Vinken2.   

Abstract

Although connexin production is mainly regulated at the protein level, altered connexin gene expression has been identified as the underlying mechanism of several pathologies. When studying the latter, appropriate methods to quantify connexin RNA levels are required. The present chapter describes a well-established reverse transcription quantitative real-time polymerase chain reaction procedure optimized for analysis of hepatic connexins. The method includes RNA extraction and subsequent quantification, generation of complementary DNA, quantitative real-time polymerase chain reaction, and data analysis.

Entities:  

Keywords:  Connexins; Minimum Information for publication of Quantitative real-time PCR Experiments; RNA extraction; Reverse transcription

Mesh:

Substances:

Year:  2016        PMID: 27207283      PMCID: PMC4994868          DOI: 10.1007/978-1-4939-3664-9_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  31 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  A simplified ribonuclease protection assay.

Authors:  Y Hod
Journal:  Biotechniques       Date:  1992-12       Impact factor: 1.993

Review 3.  Epigenetic regulation of gap junctional intercellular communication: more than a way to keep cells quiet?

Authors:  Mathieu Vinken; Evelien De Rop; Elke Decrock; Elke De Vuyst; Luc Leybaert; Tamara Vanhaecke; Vera Rogiers
Journal:  Biochim Biophys Acta       Date:  2008-08-29

4.  How to do successful gene expression analysis using real-time PCR.

Authors:  Stefaan Derveaux; Jo Vandesompele; Jan Hellemans
Journal:  Methods       Date:  2009-12-05       Impact factor: 3.608

Review 5.  mRNA: detection by in Situ and northern hybridization.

Authors:  R M Parker; N M Barnes
Journal:  Methods Mol Biol       Date:  1999

6.  PRIMO: A primer design program that applies base quality statistics for automated large-scale DNA sequencing.

Authors:  P Li; K C Kupfer; C J Davies; D Burbee; G A Evans; H R Garner
Journal:  Genomics       Date:  1997-03-15       Impact factor: 5.736

7.  Selection of reliable reference genes for RT-qPCR analysis.

Authors:  Jan Hellemans; Jo Vandesompele
Journal:  Methods Mol Biol       Date:  2014

Review 8.  Gap junctions and the connexin protein family.

Authors:  Goran Söhl; Klaus Willecke
Journal:  Cardiovasc Res       Date:  2004-05-01       Impact factor: 10.787

9.  Hexagonal array of subunits in intercellular junctions of the mouse heart and liver.

Authors:  J P Revel; M J Karnovsky
Journal:  J Cell Biol       Date:  1967-06       Impact factor: 10.539

10.  Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.

Authors:  Jo Vandesompele; Katleen De Preter; Filip Pattyn; Bruce Poppe; Nadine Van Roy; Anne De Paepe; Frank Speleman
Journal:  Genome Biol       Date:  2002-06-18       Impact factor: 13.583

View more
  3 in total

1.  Effects of Drugs Formerly Proposed for COVID-19 Treatment on Connexin43 Hemichannels.

Authors:  Axelle Cooreman; Anne Caufriez; Andrés Tabernilla; Raf Van Campenhout; Kaat Leroy; Prashant Kadam; Julen Sanz Serrano; Bruna Dos Santos Rodrigues; Pieter Annaert; Mathieu Vinken
Journal:  Int J Mol Sci       Date:  2022-04-30       Impact factor: 6.208

2.  Cholestasis Differentially Affects Liver Connexins.

Authors:  Axelle Cooreman; Raf Van Campenhout; Sara Crespo Yanguas; Eva Gijbels; Kaat Leroy; Alanah Pieters; Andrés Tabernilla; Pieter Van Brantegem; Pieter Annaert; Bruno Cogliati; Mathieu Vinken
Journal:  Int J Mol Sci       Date:  2020-09-07       Impact factor: 5.923

3.  Cartilage progenitor cells combined with PHBV in cartilage tissue engineering.

Authors:  Ke Xue; Xiaodie Zhang; Zixu Gao; Wanyao Xia; Lin Qi; Kai Liu
Journal:  J Transl Med       Date:  2019-03-29       Impact factor: 5.531

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.