Literature DB >> 27199502

Simultaneous Segmentation of Retinal Surfaces and Microcystic Macular Edema in SDOCT Volumes.

Bhavna J Antony1, Andrew Lang1, Emily K Swingle2, Omar Al-Louzi3, Aaron Carass1, Sharon Solomon4, Peter A Calabresi3, Shiv Saidha3, Jerry L Prince1.   

Abstract

Optical coherence tomography (OCT) is a noninvasive imaging modality that has begun to find widespread use in retinal imaging for the detection of a variety of ocular diseases. In addition to structural changes in the form of altered retinal layer thicknesses, pathological conditions may also cause the formation of edema within the retina. In multiple sclerosis, for instance, the nerve fiber and ganglion cell layers are known to thin. Additionally, the formation of pseudocysts called microcystic macular edema (MME) have also been observed in the eyes of about 5% of MS patients, and its presence has been shown to be correlated with disease severity. Previously, we proposed separate algorithms for the segmentation of retinal layers and MME, but since MME mainly occurs within specific regions of the retina, a simultaneous approach is advantageous. In this work, we propose an automated globally optimal graph-theoretic approach that simultaneously segments the retinal layers and the MME in volumetric OCT scans. SD-OCT scans from one eye of 12 MS patients with known MME and 8 healthy controls were acquired and the pseudocysts manually traced. The overall precision and recall of the pseudocyst detection was found to be 86.0% and 79.5%, respectively.

Entities:  

Keywords:  graph-cuts; graph-theoretic approach; microcysts; multiple surface segmentation; optical coherence tomography; retina

Year:  2016        PMID: 27199502      PMCID: PMC4869874          DOI: 10.1117/12.2214676

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  17 in total

1.  Optimal surface segmentation in volumetric images--a graph-theoretic approach.

Authors:  Kang Li; Xiaodong Wu; Danny Z Chen; Milan Sonka
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

2.  Use of varying constraints in optimal 3-D graph search for segmentation of macular optical coherence tomography images.

Authors:  Mona Haeker; Michael D Abràmoff; Xiaodong Wu; Randy Kardon; Milan Sonka
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

3.  Optical coherence tomography.

Authors:  D Huang; E A Swanson; C P Lin; J S Schuman; W G Stinson; W Chang; M R Hee; T Flotte; K Gregory; C A Puliafito
Journal:  Science       Date:  1991-11-22       Impact factor: 47.728

4.  The clinical spectrum of microcystic macular edema.

Authors:  Marloes C Burggraaff; Jennifer Trieu; Willemien A E J de Vries-Knoppert; Lisanne Balk; Axel Petzold
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-02-18       Impact factor: 4.799

5.  Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.

Authors:  Xinjian Chen; Meindert Niemeijer; Li Zhang; Kyungmoo Lee; Michael D Abramoff; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2012-03-19       Impact factor: 10.048

6.  Microcystic macular oedema, thickness of the inner nuclear layer of the retina, and disease characteristics in multiple sclerosis: a retrospective study.

Authors:  Shiv Saidha; Elias S Sotirchos; Mohamed A Ibrahim; Ciprian M Crainiceanu; Jeffrey M Gelfand; Yasir J Sepah; John N Ratchford; Jiwon Oh; Michaela A Seigo; Scott D Newsome; Laura J Balcer; Elliot M Frohman; Ari J Green; Quan D Nguyen; Peter A Calabresi
Journal:  Lancet Neurol       Date:  2012-10-04       Impact factor: 44.182

7.  Segmentation of the optic disc in 3-D OCT scans of the optic nerve head.

Authors:  Kyungmoo Lee; Meindert Niemeijer; Mona K Garvin; Young H Kwon; Milan Sonka; Michael D Abramoff
Journal:  IEEE Trans Med Imaging       Date:  2009-09-15       Impact factor: 10.048

8.  Active MS is associated with accelerated retinal ganglion cell/inner plexiform layer thinning.

Authors:  John N Ratchford; Shiv Saidha; Elias S Sotirchos; Jiwon A Oh; Michaela A Seigo; Christopher Eckstein; Mary K Durbin; Jonathan D Oakley; Scott A Meyer; Amy Conger; Teresa C Frohman; Scott D Newsome; Laura J Balcer; Elliot M Frohman; Peter A Calabresi
Journal:  Neurology       Date:  2013-01-01       Impact factor: 9.910

9.  Microcystic macular edema: retrograde maculopathy caused by optic neuropathy.

Authors:  Mathias Abegg; Muriel Dysli; Sebastian Wolf; Jens Kowal; Pascal Dufour; Martin Zinkernagel
Journal:  Ophthalmology       Date:  2013-10-15       Impact factor: 12.079

10.  Retinal layer segmentation of macular OCT images using boundary classification.

Authors:  Andrew Lang; Aaron Carass; Matthew Hauser; Elias S Sotirchos; Peter A Calabresi; Howard S Ying; Jerry L Prince
Journal:  Biomed Opt Express       Date:  2013-06-14       Impact factor: 3.732

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  4 in total

1.  Robust total retina thickness segmentation in optical coherence tomography images using convolutional neural networks.

Authors:  Freerk G Venhuizen; Bram van Ginneken; Bart Liefers; Mark J J P van Grinsven; Sascha Fauser; Carel Hoyng; Thomas Theelen; Clara I Sánchez
Journal:  Biomed Opt Express       Date:  2017-06-16       Impact factor: 3.732

2.  Three-dimensional continuous max flow optimization-based serous retinal detachment segmentation in SD-OCT for central serous chorioretinopathy.

Authors:  Menglin Wu; Wen Fan; Qiang Chen; Zhenlong Du; Xiaoli Li; Songtao Yuan; Hyunjin Park
Journal:  Biomed Opt Express       Date:  2017-08-29       Impact factor: 3.732

3.  Structured layer surface segmentation for retina OCT using fully convolutional regression networks.

Authors:  Yufan He; Aaron Carass; Yihao Liu; Bruno M Jedynak; Sharon D Solomon; Shiv Saidha; Peter A Calabresi; Jerry L Prince
Journal:  Med Image Anal       Date:  2020-10-14       Impact factor: 8.545

4.  Deep-learning approach for automated thickness measurement of epithelial tissue and scab using optical coherence tomography.

Authors:  Yubo Ji; Shufan Yang; Kanheng Zhou; Holly R Rocliffe; Antonella Pellicoro; Jenna L Cash; Ruikang Wang; Chunhui Li; Zhihong Huang
Journal:  J Biomed Opt       Date:  2022-01       Impact factor: 3.758

  4 in total

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