Literature DB >> 2719916

Classical Raman spectroscopic studies of NADH and NAD+ bound to lactate dehydrogenase by difference techniques.

H Deng1, J Zheng, D Sloan, J Burgner, R Callender.   

Abstract

The binding of the coenzymes NAD+ and NADH to lactate dehydrogenase causes significant changes in the Raman spectra of both of these molecules relative to spectra obtained in the absence of enzyme. The molecular motions of the bound adenine moiety of both NAD+ and NADH as well as adenine containing analogues of these coenzymes produce Raman bands that are essentially identical, suggesting that the binding of adenine to the enzyme is the same regardless of the nicotinamide head-group nature. We also have observed that the molecular motions of the bound adenine moiety are different from both those obtained when it is in either water, various hydrophobic solvents, or various other solvent compositions. Protonation of the bound adenine ring at the 3-position is offered as a possible explanation. Significant shifts are observed in both the stretching frequency of the carboxamide carbonyl of NAD+ and the rocking motion of the carboxamide NH2 group of NADH. These shifts are probably caused by hydrogen bonding with the enzyme. The interaction energies of these hydrogen-bonding patterns are discussed. The aromatic nature of the nicotinamide moiety of NAD+ appears to be unchanged upon binding. Pronounced changes in the Raman spectrum of the nicotinamide moiety of NADH are observed upon binding; some of these changes are understood and discussed. Finally, these results are compared to analogous results that were recently reported for liver alcohol dehydrogenase [Chen et al. (1987) Biochemistry 26, 4776-4784]. In general, the coenzyme binding properties are found to be quite similar, but not identical, for the two enzymes.

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Year:  1989        PMID: 2719916     DOI: 10.1021/bi00430a016

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  The contribution of electrostatic and van der Waals interactions to the stereospecificity of the reaction catalyzed by lactate dehydrogenase.

Authors:  J van Beek; R Callender; M R Gunner
Journal:  Biophys J       Date:  1997-02       Impact factor: 4.033

2.  Molecular properties of pyruvate bound to lactate dehydrogenase: a Raman spectroscopic study.

Authors:  H Deng; J Zheng; J Burgner; R Callender
Journal:  Proc Natl Acad Sci U S A       Date:  1989-06       Impact factor: 11.205

3.  Effect of specificity on ligand conformation in acyl-chymotrypsins.

Authors:  S S Johal; A J White; C W Wharton
Journal:  Biochem J       Date:  1994-01-15       Impact factor: 3.857

4.  Hydrogen bond interactions of G proteins with the guanine ring moiety of guanine nucleotides.

Authors:  G Weng; C X Chen; V Balogh-Nair; R Callender; D Manor
Journal:  Protein Sci       Date:  1994-01       Impact factor: 6.725

5.  Surface-enhanced Raman spectral biomarkers correlate with Ankle Brachial Index and characterize leg muscle biochemical composition of patients with peripheral arterial disease.

Authors:  Kim Cluff; Abby M Kelly; Panagiotis Koutakis; Xiang N He; Xi Huang; Yong Feng Lu; Iraklis I Pipinos; George P Casale; Jeyamkondan Subbiah
Journal:  Physiol Rep       Date:  2014-09-17
  5 in total

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