| Literature DB >> 27192395 |
Lauren S Polansky, Sajata Outin-Blenman, Ann C Moen.
Abstract
During 2004-2009, the Centers for Disease Control and Prevention (CDC) partnered with 39 national governments to strengthen global influenza surveillance. Using World Health Organization data and program evaluation indicators collected by CDC in 2013, we retrospectively evaluated progress made 4-9 years after the start of influenza surveillance capacity strengthening in the countries. Our results showed substantial increases in laboratory and sentinel surveillance capacities, which are essential for knowing which influenza strains circulate globally, detecting emergence of novel influenza, identifying viruses for vaccine selection, and determining the epidemiology of respiratory illness. Twenty-eight of 35 countries responding to a 2013 questionnaire indicated that they have leveraged routine influenza surveillance platforms to detect other pathogens. This additional surveillance illustrates increased health-system strengthening. Furthermore, 34 countries reported an increased ability to use data in decision making; data-driven decisions are critical for improving local prevention and control of influenza around the world.Entities:
Keywords: capacity building; global health security; influenza; program evaluation; surveillance; systems strengthening
Year: 2016 PMID: 27192395 PMCID: PMC4880096 DOI: 10.3201/eid.2206.151521
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Countries that partnered with CDC in capacity strengthening for influenza surveillance, by start year and World Health Organization Region, 2004–2009*
| Start year | AFR | EMR | EUR | AMR | SEAR | WPR |
|---|---|---|---|---|---|---|
| 2004 | – | Pakistan | – | – | India, Indonesia, Thailand | China, Mongolia, Philippines |
| 2006 | Angola Democratic Republic of Congo Cote d’Ivoire Ethiopia Nigeria Rwanda South Africa Republic of Tanzania Uganda | Afghanistan Morocco | Armenia Georgia Russia Ukraine | Brazil Mexico | Bangladesh | Vietnam Cambodia Laos People’s Democratic Republic |
| 2009 | Madagascar
Zambia | Egypt | Republic of Moldova | Paraguay | Nepal
Sri Lanka | – |
| Total | 11 | 4 | 5 | 3 | 6 | 6 |
*A total of 39 countries partnered with CDC for influenza surveillance capacity strengthening during different years; 35 countries responded to a 2013 questionnaire and are included in our analysis. AFR, African Region; CDC, Centers for Disease Control and Prevention; EMR, Eastern Mediterranean Region; EUR, European Region; AMR, Region of the Americas; SEAR, South East Asian Region; WPR, Western Pacific Region; –, no countries partnered with CDC during that start year.
Figure 1Changes in numbers of influenza specimens processed and in numbers of viruses detected per year among 35 countries that partnered with the Centers for Disease Control and Prevention to strengthen influenza surveillance capacity, 2004–2013. From a total of 39 participating countries, 35 responded to a 2013 questionnaire and are included in this analysis.
Figure 2Number of countries that reported adding different virology testing assays to routine influenza laboratory testing platform by virus type from the start of the partnership program with the Centers for Disease Control and Prevention to strengthen influenza surveillance capacity, 2004–2013. From a total of 39 participating countries, 35 responded to a 2013 questionnaire; 28 reported adding tests for other pathogens.
Percentage of countries with data available in the WHO FluNet for 90%–100% of weeks per year by country start year in the program, 2004–2013*
| Start year | % Countries | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| 2004 | 2005 | 2006 | 2007 | 2008 | 2009 | 2010 | 2011 | 2012 | 2013 | ||
| 2004, n = 7 | 44 | 33 | 33 | 56 | 67 | 67 | 100 | 100 | 100 | 100 | |
| 2006, n = 21 | 13 | 14 | 22 | 30 | 30 | 30 | 70 | 70 | 77 | 73 | |
| 2009, n = 7 | 29 | 29 | 14 | 29 | 43 | 43 | 71 | 86 | 100 | 100 | |
*A total of 39 countries partnered with CDC for influenza surveillance capacity strengthening during different years; 35 countries responded to a 2013 questionnaire and are included in our analysis. CDC, Centers for Disease Control and Prevention; WHO, World Health Organization.
Most commonly reported ways that 35 countries used CDC program support to strengthen their ability to report national virologic data to WHO FluNet on a weekly basis, by rank order*
| Methods used | |
|---|---|
| 1. Establishing reverse transcription PCR capabilities | |
| 2. Enhancing electronic database management (i.e., computer, internet, database, software, Web site) | |
| 3. Training database managers, laboratory managers, and laboratory diagnostic technicians | |
| 4. Developing a standardized weekly national report with indicators | |
| 5. Establishing a laboratory focal person to liaise with the sentinel network | |
*A total of 39 countries partnered with CDC for influenza surveillance capacity strengthening during different years; 35 countries responded to a 2013 questionnaire and are included in this analysis. CDC, Centers for Disease Control and Prevention; WHO, World Health Organization.
Countries with sentinel sites capable of collecting specimens ≥1 time per week from patients screened for ILI or SARI in WHO regions*
| WHO region | Start year | 2013 | ||||
|---|---|---|---|---|---|---|
| No. countries with ≥1 site | Total no. sites | No. countries with ≥1 site | Total no. sites | Total increase in sites | ||
| AFR | 3 | 174 | 11 | 231 | 57 | |
| EMR | 3 | 126 | 4 | 176 | 50 | |
| EUR | 0 | 0 | 5 | 94 | 94 | |
| AMR | 2 | 60 | 3 | 807 | 747 | |
| SEAR | 6 | 55 | 6 | 83 | 28 | |
| WPR | 3 | 31 | 6 | 684 | 653 | |
| Total | 17 | 446 | 35 | 2,075 | 1,629 | |
*A total of 39 countries partnered with CDC for influenza surveillance capacity strengthening during different years; 35 countries responded to a 2013 questionnaire and are included in our analysis. AFR, African Region; AMR, Region of the Americas; CDC, Centers for Disease Control and Prevention; EMR, Eastern Mediterranean Region; EUR, European Region; ILI, influenza-like illness; SARI, severe acute respiratory infection; SEAR, South-East Asian Region; WHO, World Health Organization; WPR, Western Pacific Region.
Figure 3Number of countries that used influenza sentinel sites to initiate surveillance for other infectious diseases or syndromes since the start of the partnership program with the Centers for Disease Control and Prevention to strengthen influenza surveillance, 2004–2013. From a total of 39 participating countries, 35 responded to a 2013 questionnaire; 29 reported initiating surveillance for other diseases or syndromes.
Country perspectives on the role of surveillance system capacities during the 2009 influenza A(H1N1) pandemic in countries with 0–1 influenza sentinel sites at the start of the program*
| WHO region | Perspective |
|---|---|
| South-East Asia | “The first fatal case during the pandemic was identified by our [influenza] network as part of hospital based surveillance activities. The network took a frontline role in providing diagnostics to the respective regions, actively participated in pandemic mitigation activities in coordination with the regional health authorities.” |
| African | “The cooperative agreement has created awareness of influenza virus among health workers, policy makers and communities at large [and] laboratory capacity to test the virus: before there was no idea if the virus [was] in existence in the country, the types and subtypes, or the staff capacity to identify and respond to influenza.”
“The use of the case definitions for influenza-like illness (ILI) and severe acute respiratory infection (SARI) and the virologic analysis of the samples from cases has helped in identifying the onset of the pandemic flu H1N1 in the population and the period of dominance which informed the type of control measures put in place.” |
| Eastern Mediterranean | “We routinely collect data on ILI and SARI cases. The sentinel sites send the epidemiologic data and specimen to [our] NIC [National Influenza Centre] for verification. We have certain examples of SARI outbreaks that the system easily detected and responded to.” |
| European | “Sentinel sites are [now] located [along] bird migration routes and near the countries [‘] points of entry. Established SARI case-based surveillance with lab confirmation is very helpful in order to provide timely detection and response to abnormal influenza.” |
| Western Pacific | “Routine surveillance of epidemiology and viruses provided data on circulating strains with epi-clinical information which helped to detect abnormal influenza and thus helped to implement a plan.” |
*A total of 39 countries partnered with CDC for influenza surveillance capacity strengthening during different years; 35 countries responded to a 2013 questionnaire and are included in our analysis. South East Asia Region had 1 sentinel site at the beginning of the program; all other regions had no sites at program start. CDC, Centers for Disease Control and Prevention; WHO, World Health Organization.
Progress in national estimates and recommendations tied to availability of routine national influenza surveillance data for 35 countries participating in CDC influenza surveillance capacity strengthening, 2004–2013*
| Measures | Completed† | In progress‡ | Not yet available | |
|---|---|---|---|---|
| Before | During | |||
| Seasonality | 10 | 19 | 4 | 2 |
| Burden of influenza disease among sentinel sites | 1 | 8 | 17 | 9 |
| Risk factors for influenza disease | 3 | 4 | 14 | 14 |
| Burden of influenza disease in population | 1 | 4 | 10 | 20 |
| Antiviral recommendations | 7 | 17 | 0 | 10 |
| Vaccine recommendations | 9 | 8 | 3 | 15 |
| Vaccine acceptability | 3 | 6 | 3 | 23 |
*A total of 39 countries partnered with CDC for influenza surveillance capacity strengthening during different years; 35 countries responded to a 2013 questionnaire and are included in our analysis. CDC, Centers for Disease Control and Prevention. †Completed means that the measure was completed before or during the 10-year CDC capability-strengthening program. ‡In progress means that the measure was in progress during the 10-year program.