Literature DB >> 27182438

Model-free methods to study membrane environmental probes: a comparison of the spectral phasor and generalized polarization approaches.

Leonel Malacrida1, Enrico Gratton2, David M Jameson3.   

Abstract

In this note, we present a discussion of the advantages and scope of model-free analysis methods applied to the popular solvatochromic probe LAURDAN, which is widely used as an environmental probe to study dynamics and structure in membranes. In particular, we compare and contrast the generalized polarization approach with the spectral phasor approach. To illustrate our points we utilize several model membrane systems containing pure lipid phases and, in some cases, cholesterol or surfactants. We demonstrate that the spectral phasor method offers definitive advantages in the case of complex systems.

Entities:  

Keywords:  LAURDAN; generalized polarization; lung surfactant; membrane biophysics; spectral phasor

Year:  2015        PMID: 27182438      PMCID: PMC4862737          DOI: 10.1088/2050-6120/3/4/047001

Source DB:  PubMed          Journal:  Methods Appl Fluoresc        ISSN: 2050-6120            Impact factor:   3.009


  18 in total

1.  Applications of phasor plots to in vitro protein studies.

Authors:  Nicholas G James; Justin A Ross; Martin Stefl; David M Jameson
Journal:  Anal Biochem       Date:  2010-11-13       Impact factor: 3.365

2.  The phasor approach to fluorescence lifetime imaging analysis.

Authors:  Michelle A Digman; Valeria R Caiolfa; Moreno Zamai; Enrico Gratton
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

3.  Liquid-ordered phases induced by cholesterol: a compendium of binary phase diagrams.

Authors:  Derek Marsh
Journal:  Biochim Biophys Acta       Date:  2010-01-07

4.  Phase fluctuation in phospholipid membranes revealed by Laurdan fluorescence.

Authors:  T Parasassi; G De Stasio; A d'Ubaldo; E Gratton
Journal:  Biophys J       Date:  1990-06       Impact factor: 4.033

5.  Coexisting stripe- and patch-shaped domains in giant unilamellar vesicles.

Authors:  Li Li; Ji-Xin Cheng
Journal:  Biochemistry       Date:  2006-10-03       Impact factor: 3.162

6.  Growth of solid domains in model membranes: quantitative image analysis reveals a strong correlation between domain shape and spatial position.

Authors:  Uffe Bernchou; John Hjort Ipsen; Adam Cohen Simonsen
Journal:  J Phys Chem B       Date:  2009-05-21       Impact factor: 2.991

7.  Abrupt modifications of phospholipid bilayer properties at critical cholesterol concentrations.

Authors:  T Parasassi; A M Giusti; M Raimondi; E Gratton
Journal:  Biophys J       Date:  1995-05       Impact factor: 4.033

8.  Cholesterol rules: direct observation of the coexistence of two fluid phases in native pulmonary surfactant membranes at physiological temperatures.

Authors:  Jorge Bernardino de la Serna; Jesus Perez-Gil; Adam C Simonsen; Luis A Bagatolli
Journal:  J Biol Chem       Date:  2004-07-01       Impact factor: 5.157

Review 9.  Structure of pulmonary surfactant membranes and films: the role of proteins and lipid-protein interactions.

Authors:  Jesús Pérez-Gil
Journal:  Biochim Biophys Acta       Date:  2008-05-11

Review 10.  Lipid polymorphism and the functional roles of lipids in biological membranes.

Authors:  P R Cullis; B de Kruijff
Journal:  Biochim Biophys Acta       Date:  1979-12-20
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  12 in total

1.  LAURDAN fluorescence and phasor plots reveal the effects of a H2O2 bolus in NIH-3T3 fibroblast membranes dynamics and hydration.

Authors:  Leonel Malacrida; Enrico Gratton
Journal:  Free Radic Biol Med       Date:  2018-06-06       Impact factor: 7.376

2.  Hyperspectral imaging in highly scattering media by the spectral phasor approach using two filters.

Authors:  Alexander Dvornikov; Enrico Gratton
Journal:  Biomed Opt Express       Date:  2018-07-03       Impact factor: 3.732

3.  Spectral phasor analysis of LAURDAN fluorescence in live A549 lung cells to study the hydration and time evolution of intracellular lamellar body-like structures.

Authors:  Leonel Malacrida; Soledad Astrada; Arturo Briva; Mariela Bollati-Fogolín; Enrico Gratton; Luis A Bagatolli
Journal:  Biochim Biophys Acta       Date:  2016-07-30

Review 4.  Visualizing the regulation of SLC34 proteins at the apical membrane.

Authors:  Moshe Levi; Enrico Gratton
Journal:  Pflugers Arch       Date:  2019-01-06       Impact factor: 3.657

5.  StarD5: an ER stress protein regulates plasma membrane and intracellular cholesterol homeostasis.

Authors:  Daniel Rodriguez-Agudo; Leonel Malacrida; Genta Kakiyama; Tavis Sparrer; Carolina Fortes; Michael Maceyka; Mark A Subler; Jolene J Windle; Enrico Gratton; William M Pandak; Gregorio Gil
Journal:  J Lipid Res       Date:  2019-04-23       Impact factor: 5.922

6.  Fluorescence Lifetime Phasor Analysis of the Decamer-Dimer Equilibrium of Human Peroxiredoxin 1.

Authors:  Sebastián F Villar; Joaquín Dalla-Rizza; Matías N Möller; Gerardo Ferrer-Sueta; Leonel Malacrida; David M Jameson; Ana Denicola
Journal:  Int J Mol Sci       Date:  2022-05-09       Impact factor: 6.208

7.  Differences between FLIM phasor analyses for data collected with the Becker and Hickl SPC830 card and with the FLIMbox card.

Authors:  Suman Ranjit; Leonel Malacrida; Enrico Gratton
Journal:  Microsc Res Tech       Date:  2018-10-08       Impact factor: 2.769

8.  Phasor-based hyperspectral snapshot microscopy allows fast imaging of live, three-dimensional tissues for biomedical applications.

Authors:  Per Niklas Hedde; Rachel Cinco; Leonel Malacrida; Andrés Kamaid; Enrico Gratton
Journal:  Commun Biol       Date:  2021-06-11

9.  Identification of microplastics using 4-dimethylamino-4'-nitrostilbene solvatochromic fluorescence.

Authors:  Giuseppe Sancataldo; Vittorio Ferrara; Francesco Paolo Bonomo; Delia Francesca Chillura Martino; Mariano Licciardi; Bruno Giuseppe Pignataro; Valeria Vetri
Journal:  Microsc Res Tech       Date:  2021-05-28       Impact factor: 2.893

10.  Alteration in Fluidity of Cell Plasma Membrane in Huntington Disease Revealed by Spectral Phasor Analysis.

Authors:  Sara Sameni; Leonel Malacrida; Zhiqun Tan; Michelle A Digman
Journal:  Sci Rep       Date:  2018-01-15       Impact factor: 4.379

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