Literature DB >> 27180097

Thalassospira australica sp. nov. isolated from sea water.

Elena P Ivanova1, Mario López-Pérez2, Hayden K Webb3, Hooi Jun Ng3, Thi Hoang Yen Dang3, Natalia V Zhukova4,5, Valery V Mikhailov6,7, Russell J Crawford3, Francisco Rodriguez-Valera2.   

Abstract

Two Gram-negative, non-pigmented, motile bacteria were isolated from a sea water sample collected at St. Kilda Beach, Port Philip Bay, Victoria, Australia. The two strains were found to grow between 4 and 40 °C, pH 5-10 and tolerate up to 10 % NaCl. A phylogenetic study, based on a 16S rRNA gene sequence analysis indicated that strains NP 3b2(T) and H 94 belong to the genus Thalassospira. The sequence similarity of the 16S rRNA gene between the two new isolates is 99.8 % and between these strains and all validly named Thalassospira species was found to be in the range of 95-99.4 %. The DNA-DNA relatedness between the two strains was found to be 80.2 %, while relatedness with other validly named species of the genus Thalassospira was between 53 and 65 %. The average nucleotide identity (ANI) and the in silico genome-to-genome distance (GGD) between the two bacteria and T. profundimaris WP0211(T), T. xiamenensis M-5(T), 'T. permensis' NBRC 106175(T) and T. lucentensis QMT2(T) was 76-82 % and 21-25 %, respectively. The results of phylogenetic and genomic analysis, together with physiological and biochemical properties, indicated that the two strains represent a new species of the genus Thalassospira. Based on these data, a new species, Thalassospira australica, is proposed with strain NP 3b2(T) (=KMM 6365(T) = JCM 31222(T)) as the type strain.

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Keywords:  Genomic taxonomy; Marine bacteria; New species; Phylogeny; Taxonomy; Thalassospira

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Year:  2016        PMID: 27180097     DOI: 10.1007/s10482-016-0710-9

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  1 in total

1.  Computational prediction of microRNAs in marine bacteria of the genus Thalassospira.

Authors:  Thi Hoang Yen Dang; Sonika Tyagi; Glenn D'Cunha; Mrinal Bhave; Russell Crawford; Elena P Ivanova
Journal:  PLoS One       Date:  2019-03-12       Impact factor: 3.240

  1 in total

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