Literature DB >> 27179420

Functional characterizations of venom phenotypes in the eastern diamondback rattlesnake (Crotalus adamanteus) and evidence for expression-driven divergence in toxic activities among populations.

Mark J Margres1, Robert Walls2, Montamas Suntravat2, Sara Lucena2, Elda E Sánchez3, Darin R Rokyta4.   

Abstract

Phenotypes frequently vary across and within species. The connection between specific phenotypic effects and function, however, is less understood despite being essential to our understanding of the adaptive process. Snake venoms are ideal for identifying functionally important phenotypic variation because venom variation is common, and venoms can be functionally characterized through simple assays and toxicity measurements. Previous work with the eastern diamondback rattlesnake (Crotalus adamanteus) used multivariate statistical approaches to identify six unique venom phenotypes. We functionally characterized hemolytic, gelatinase, fibrinogenolytic, and coagulant activity for all six phenotypes, as well as one additional venom, to determine if the statistically significant differences in toxin expression levels previously documented corresponded to differences in venom activity. In general, statistical differences in toxin expression predicted the identified functional differences, or lack thereof, in toxic activity, demonstrating that the statistical approach used to characterize C. adamanteus venoms was a fair representation of biologically meaningful differences. Minor differences in activity not accounted for by the statistical model may be the result of amino-acid differences and/or post-translational modifications, but overall we were able to link variation in protein expression levels to variation in function as predicted by multivariate statistical approaches.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Expression variation; Toxic activities; Venom

Mesh:

Substances:

Year:  2016        PMID: 27179420      PMCID: PMC5178144          DOI: 10.1016/j.toxicon.2016.05.005

Source DB:  PubMed          Journal:  Toxicon        ISSN: 0041-0101            Impact factor:   3.033


  68 in total

1.  Expression Differentiation Is Constrained to Low-Expression Proteins over Ecological Timescales.

Authors:  Mark J Margres; Kenneth P Wray; Margaret Seavy; James J McGivern; Nathanael D Herrera; Darin R Rokyta
Journal:  Genetics       Date:  2015-11-06       Impact factor: 4.562

Review 2.  Snake venom disintegrins: evolution of structure and function.

Authors:  Juan J Calvete; Cezary Marcinkiewicz; Daniel Monleón; Vicent Esteve; Bernardo Celda; Paula Juárez; Libia Sanz
Journal:  Toxicon       Date:  2005-04-12       Impact factor: 3.033

Review 3.  Snake venom variability: methods of study, results and interpretation.

Authors:  J P Chippaux; V Williams; J White
Journal:  Toxicon       Date:  1991       Impact factor: 3.033

4.  Snake population venomics: proteomics-based analyses of individual variation reveals significant gene regulation effects on venom protein expression in Sistrurus rattlesnakes.

Authors:  H Lisle Gibbs; Libia Sanz; Juan J Calvete
Journal:  J Mol Evol       Date:  2009-01-30       Impact factor: 2.395

5.  Isolation and biochemical characterization of a fibrinolytic proteinase from Bothrops leucurus (white-tailed jararaca) snake venom.

Authors:  C A Bello; A L N Hermogenes; A Magalhaes; S S Veiga; L H Gremski; M Richardson; Eladio F Sanchez
Journal:  Biochimie       Date:  2005-08-19       Impact factor: 4.079

6.  Contrasting modes and tempos of venom expression evolution in two snake species.

Authors:  Mark J Margres; James J McGivern; Margaret Seavy; Kenneth P Wray; Jack Facente; Darin R Rokyta
Journal:  Genetics       Date:  2014-11-11       Impact factor: 4.562

7.  Cross reactivity of three antivenoms against North American snake venoms.

Authors:  Elda E Sánchez; María Susana Ramírez; Jacob A Galán; Gonzalo López; Alexis Rodríguez-Acosta; John C Pérez
Journal:  Toxicon       Date:  2003-03-01       Impact factor: 3.033

8.  Ontogenetic variations in the venom proteome of the Amazonian snake Bothrops atrox.

Authors:  Rafael A P Guércio; Anna Shevchenko; Andrej Shevchenko; Jorge L López-Lozano; Jaime Paba; Marcelo V Sousa; Carlos A O Ricart
Journal:  Proteome Sci       Date:  2006-05-11       Impact factor: 2.480

9.  Inventing an arsenal: adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes.

Authors:  Vincent J Lynch
Journal:  BMC Evol Biol       Date:  2007-01-18       Impact factor: 3.260

10.  RNA-seq and high-definition mass spectrometry reveal the complex and divergent venoms of two rear-fanged colubrid snakes.

Authors:  James J McGivern; Kenneth P Wray; Mark J Margres; Michelle E Couch; Stephen P Mackessy; Darin R Rokyta
Journal:  BMC Genomics       Date:  2014-12-03       Impact factor: 3.969

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  11 in total

1.  Selection To Increase Expression, Not Sequence Diversity, Precedes Gene Family Origin and Expansion in Rattlesnake Venom.

Authors:  Mark J Margres; Alyssa T Bigelow; Emily Moriarty Lemmon; Alan R Lemmon; Darin R Rokyta
Journal:  Genetics       Date:  2017-05-05       Impact factor: 4.562

2.  The Chemosensory Repertoire of the Eastern Diamondback Rattlesnake (Crotalus adamanteus) Reveals Complementary Genetics of Olfactory and Vomeronasal-Type Receptors.

Authors:  Michael P Hogan; A Carl Whittington; Michael B Broe; Micaiah J Ward; H Lisle Gibbs; Darin R Rokyta
Journal:  J Mol Evol       Date:  2021-04-21       Impact factor: 2.395

3.  The Tiger Rattlesnake genome reveals a complex genotype underlying a simple venom phenotype.

Authors:  Mark J Margres; Rhett M Rautsaw; Jason L Strickland; Andrew J Mason; Tristan D Schramer; Erich P Hofmann; Erin Stiers; Schyler A Ellsworth; Gunnar S Nystrom; Michael P Hogan; Daniel A Bartlett; Timothy J Colston; David M Gilbert; Darin R Rokyta; Christopher L Parkinson
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-26       Impact factor: 12.779

4.  Biological and Proteolytic Variation in the Venom of Crotalus scutulatus scutulatus from Mexico.

Authors:  Miguel Borja; Edgar Neri-Castro; Gamaliel Castañeda-Gaytán; Jason L Strickland; Christopher L Parkinson; Juan Castañeda-Gaytán; Roberto Ponce-López; Bruno Lomonte; Alejandro Olvera-Rodríguez; Alejandro Alagón; Rebeca Pérez-Morales
Journal:  Toxins (Basel)       Date:  2018-01-08       Impact factor: 4.546

5.  The genetics of venom ontogeny in the eastern diamondback rattlesnake (Crotalus adamanteus).

Authors:  Darin R Rokyta; Mark J Margres; Micaiah J Ward; Elda E Sanchez
Journal:  PeerJ       Date:  2017-04-27       Impact factor: 2.984

6.  Comparative venom gland transcriptomics of Naja kaouthia (monocled cobra) from Malaysia and Thailand: elucidating geographical venom variation and insights into sequence novelty.

Authors:  Kae Yi Tan; Choo Hock Tan; Lawan Chanhome; Nget Hong Tan
Journal:  PeerJ       Date:  2017-04-05       Impact factor: 2.984

7.  The habu genome reveals accelerated evolution of venom protein genes.

Authors:  Hiroki Shibata; Takahito Chijiwa; Naoko Oda-Ueda; Hitomi Nakamura; Kazuaki Yamaguchi; Shousaku Hattori; Kazumi Matsubara; Yoichi Matsuda; Akifumi Yamashita; Akiko Isomoto; Kazuki Mori; Kosuke Tashiro; Satoru Kuhara; Shinichi Yamasaki; Manabu Fujie; Hiroki Goto; Ryo Koyanagi; Takeshi Takeuchi; Yasuyuki Fukumaki; Motonori Ohno; Eiichi Shoguchi; Kanako Hisata; Noriyuki Satoh; Tomohisa Ogawa
Journal:  Sci Rep       Date:  2018-07-26       Impact factor: 4.379

8.  Exploring the Diversity and Novelty of Toxin Genes in Naja sumatrana, the Equatorial Spitting Cobra from Malaysia through De Novo Venom-Gland Transcriptomics.

Authors:  Ho Phin Chong; Kae Yi Tan; Nget Hong Tan; Choo Hock Tan
Journal:  Toxins (Basel)       Date:  2019-02-11       Impact factor: 4.546

9.  Toxin expression in snake venom evolves rapidly with constant shifts in evolutionary rates.

Authors:  Agneesh Barua; Alexander S Mikheyev
Journal:  Proc Biol Sci       Date:  2020-04-29       Impact factor: 5.349

10.  Comparative venom-gland transcriptomics and venom proteomics of four Sidewinder Rattlesnake (Crotalus cerastes) lineages reveal little differential expression despite individual variation.

Authors:  Erich P Hofmann; Rhett M Rautsaw; Jason L Strickland; Matthew L Holding; Michael P Hogan; Andrew J Mason; Darin R Rokyta; Christopher L Parkinson
Journal:  Sci Rep       Date:  2018-10-19       Impact factor: 4.379

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