Literature DB >> 27174990

Histone H3K36 mutations promote sarcomagenesis through altered histone methylation landscape.

Chao Lu1, Siddhant U Jain2, Dominik Hoelper2, Denise Bechet3, Rosalynn C Molden4, Leili Ran5, Devan Murphy5, Sriram Venneti6, Meera Hameed7, Bruce R Pawel8, Jay S Wunder9, Brendan C Dickson10, Stefan M Lundgren2, Krupa S Jani11, Nicolas De Jay3, Simon Papillon-Cavanagh3, Irene L Andrulis12, Sarah L Sawyer13, David Grynspan13, Robert E Turcotte14, Javad Nadaf3, Somayyeh Fahiminiyah3, Tom W Muir11, Jacek Majewski3, Craig B Thompson15, Ping Chi16, Benjamin A Garcia17, C David Allis18, Nada Jabado19, Peter W Lewis20.   

Abstract

Several types of pediatric cancers reportedly contain high-frequency missense mutations in histone H3, yet the underlying oncogenic mechanism remains poorly characterized. Here we report that the H3 lysine 36-to-methionine (H3K36M) mutation impairs the differentiation of mesenchymal progenitor cells and generates undifferentiated sarcoma in vivo. H3K36M mutant nucleosomes inhibit the enzymatic activities of several H3K36 methyltransferases. Depleting H3K36 methyltransferases, or expressing an H3K36I mutant that similarly inhibits H3K36 methylation, is sufficient to phenocopy the H3K36M mutation. After the loss of H3K36 methylation, a genome-wide gain in H3K27 methylation leads to a redistribution of polycomb repressive complex 1 and de-repression of its target genes known to block mesenchymal differentiation. Our findings are mirrored in human undifferentiated sarcomas in which novel K36M/I mutations in H3.1 are identified.
Copyright © 2016, American Association for the Advancement of Science.

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Year:  2016        PMID: 27174990      PMCID: PMC4928577          DOI: 10.1126/science.aac7272

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  25 in total

1.  Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.

Authors:  Jeremy Schwartzentruber; Andrey Korshunov; Xiao-Yang Liu; David T W Jones; Elke Pfaff; Karine Jacob; Dominik Sturm; Adam M Fontebasso; Dong-Anh Khuong Quang; Martje Tönjes; Volker Hovestadt; Steffen Albrecht; Marcel Kool; Andre Nantel; Carolin Konermann; Anders Lindroth; Natalie Jäger; Tobias Rausch; Marina Ryzhova; Jan O Korbel; Thomas Hielscher; Peter Hauser; Miklos Garami; Almos Klekner; Laszlo Bognar; Martin Ebinger; Martin U Schuhmann; Wolfram Scheurlen; Arnulf Pekrun; Michael C Frühwald; Wolfgang Roggendorf; Christoph Kramm; Matthias Dürken; Jeffrey Atkinson; Pierre Lepage; Alexandre Montpetit; Magdalena Zakrzewska; Krzystof Zakrzewski; Pawel P Liberski; Zhifeng Dong; Peter Siegel; Andreas E Kulozik; Marc Zapatka; Abhijit Guha; David Malkin; Jörg Felsberg; Guido Reifenberger; Andreas von Deimling; Koichi Ichimura; V Peter Collins; Hendrik Witt; Till Milde; Olaf Witt; Cindy Zhang; Pedro Castelo-Branco; Peter Lichter; Damien Faury; Uri Tabori; Christoph Plass; Jacek Majewski; Stefan M Pfister; Nada Jabado
Journal:  Nature       Date:  2012-01-29       Impact factor: 49.962

2.  Reduced H3K27me3 and DNA hypomethylation are major drivers of gene expression in K27M mutant pediatric high-grade gliomas.

Authors:  Sebastian Bender; Yujie Tang; Anders M Lindroth; Volker Hovestadt; David T W Jones; Marcel Kool; Marc Zapatka; Paul A Northcott; Dominik Sturm; Wei Wang; Bernhard Radlwimmer; Jonas W Højfeldt; Nathalène Truffaux; David Castel; Simone Schubert; Marina Ryzhova; Huriye Seker-Cin; Jan Gronych; Pascal David Johann; Sebastian Stark; Jochen Meyer; Till Milde; Martin Schuhmann; Martin Ebinger; Camelia-Maria Monoranu; Anitha Ponnuswami; Spenser Chen; Chris Jones; Olaf Witt; V Peter Collins; Andreas von Deimling; Nada Jabado; Stephanie Puget; Jacques Grill; Kristian Helin; Andrey Korshunov; Peter Lichter; Michelle Monje; Christoph Plass; Yoon-Jae Cho; Stefan M Pfister
Journal:  Cancer Cell       Date:  2013-10-31       Impact factor: 31.743

3.  Histone methylation by PRC2 is inhibited by active chromatin marks.

Authors:  Frank W Schmitges; Archana B Prusty; Mahamadou Faty; Alexandra Stützer; Gondichatnahalli M Lingaraju; Jonathan Aiwazian; Ragna Sack; Daniel Hess; Ling Li; Shaolian Zhou; Richard D Bunker; Urs Wirth; Tewis Bouwmeester; Andreas Bauer; Nga Ly-Hartig; Kehao Zhao; Homan Chan; Justin Gu; Heinz Gut; Wolfgang Fischle; Jürg Müller; Nicolas H Thomä
Journal:  Mol Cell       Date:  2011-05-06       Impact factor: 17.970

4.  EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments.

Authors:  Ning Leng; John A Dawson; James A Thomson; Victor Ruotti; Anna I Rissman; Bart M G Smits; Jill D Haag; Michael N Gould; Ron M Stewart; Christina Kendziorski
Journal:  Bioinformatics       Date:  2013-02-21       Impact factor: 6.937

5.  H3K36 methylation antagonizes PRC2-mediated H3K27 methylation.

Authors:  Wen Yuan; Mo Xu; Chang Huang; Nan Liu; She Chen; Bing Zhu
Journal:  J Biol Chem       Date:  2011-01-14       Impact factor: 5.157

6.  Quantitative ChIP-Seq normalization reveals global modulation of the epigenome.

Authors:  David A Orlando; Mei Wei Chen; Victoria E Brown; Snehakumari Solanki; Yoon J Choi; Eric R Olson; Christian C Fritz; James E Bradner; Matthew G Guenther
Journal:  Cell Rep       Date:  2014-10-30       Impact factor: 9.423

7.  Histone H3 lysine-to-methionine mutants as a paradigm to study chromatin signaling.

Authors:  Hans-Martin Herz; Marc Morgan; Xin Gao; Jessica Jackson; Ryan Rickels; Selene K Swanson; Laurence Florens; Michael P Washburn; Joel C Eissenberg; Ali Shilatifard
Journal:  Science       Date:  2014-08-29       Impact factor: 47.728

8.  Distinct H3F3A and H3F3B driver mutations define chondroblastoma and giant cell tumor of bone.

Authors:  Sam Behjati; Patrick S Tarpey; Nadège Presneau; Susanne Scheipl; Nischalan Pillay; Peter Van Loo; David C Wedge; Susanna L Cooke; Gunes Gundem; Helen Davies; Serena Nik-Zainal; Sancha Martin; Stuart McLaren; Victoria Goodie; Ben Robinson; Adam Butler; Jon W Teague; Dina Halai; Bhavisha Khatri; Ola Myklebost; Daniel Baumhoer; Gernot Jundt; Rifat Hamoudi; Roberto Tirabosco; M Fernanda Amary; P Andrew Futreal; Michael R Stratton; Peter J Campbell; Adrienne M Flanagan
Journal:  Nat Genet       Date:  2013-10-27       Impact factor: 38.330

9.  RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome.

Authors:  Bo Li; Colin N Dewey
Journal:  BMC Bioinformatics       Date:  2011-08-04       Impact factor: 3.307

10.  deepTools: a flexible platform for exploring deep-sequencing data.

Authors:  Fidel Ramírez; Friederike Dündar; Sarah Diehl; Björn A Grüning; Thomas Manke
Journal:  Nucleic Acids Res       Date:  2014-05-05       Impact factor: 16.971

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  164 in total

Review 1.  SETting the Stage for Cancer Development: SETD2 and the Consequences of Lost Methylation.

Authors:  Catherine C Fahey; Ian J Davis
Journal:  Cold Spring Harb Perspect Med       Date:  2017-05-01       Impact factor: 6.915

2.  Precocious chondrocyte differentiation disrupts skeletal growth in Kabuki syndrome mice.

Authors:  Jill A Fahrner; Wan-Ying Lin; Ryan C Riddle; Leandros Boukas; Valerie B DeLeon; Sheetal Chopra; Susan E Lad; Teresa Romeo Luperchio; Kasper D Hansen; Hans T Bjornsson
Journal:  JCI Insight       Date:  2019-10-17

3.  Epigenomic Reordering Induced by Polycomb Loss Drives Oncogenesis but Leads to Therapeutic Vulnerabilities in Malignant Peripheral Nerve Sheath Tumors.

Authors:  John B Wojcik; Dylan M Marchione; Simone Sidoli; Anissa Djedid; Amanda Lisby; Jacek Majewski; Benjamin A Garcia
Journal:  Cancer Res       Date:  2019-03-21       Impact factor: 12.701

Review 4.  Targeting epigenetic regulators for cancer therapy: mechanisms and advances in clinical trials.

Authors:  Yuan Cheng; Cai He; Manni Wang; Xuelei Ma; Fei Mo; Shengyong Yang; Junhong Han; Xiawei Wei
Journal:  Signal Transduct Target Ther       Date:  2019-12-17

5.  An epigenetic tipping point in cancer comes under the microscope.

Authors:  Martyna W Sroka; Christopher R Vakoc
Journal:  Nature       Date:  2021-02       Impact factor: 49.962

Review 6.  Oncogenic Mechanisms of Histone H3 Mutations.

Authors:  Daniel N Weinberg; C David Allis; Chao Lu
Journal:  Cold Spring Harb Perspect Med       Date:  2017-01-03       Impact factor: 6.915

7.  Depletion of H3K36me2 recapitulates epigenomic and phenotypic changes induced by the H3.3K36M oncohistone mutation.

Authors:  Kartik N Rajagopalan; Xiao Chen; Daniel N Weinberg; Haifen Chen; Jacek Majewski; C David Allis; Chao Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-02       Impact factor: 11.205

Review 8.  H3K27 methylation: a promiscuous repressive chromatin mark.

Authors:  Elizabeth T Wiles; Eric U Selker
Journal:  Curr Opin Genet Dev       Date:  2016-12-08       Impact factor: 5.578

Review 9.  Targeting the cancer epigenome for therapy.

Authors:  Peter A Jones; Jean-Pierre J Issa; Stephen Baylin
Journal:  Nat Rev Genet       Date:  2016-09-15       Impact factor: 53.242

Review 10.  DNA mismatch repair in the chromatin context: Mechanisms and therapeutic potential.

Authors:  Yaping Huang; Guo-Min Li
Journal:  DNA Repair (Amst)       Date:  2020-09
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