Literature DB >> 27166778

NMR structural biology of sulfated glycans.

Paulo A G Soares1, Ismael N L Queiroz1, Vitor H Pomin1.   

Abstract

Sulfated fucans, sulfated galactans, and glycosaminoglycans are extensively studied worldwide in terms of both structure and biomedical functions. Liquid-state nuclear magnetic resonance (NMR) spectroscopy is the most employed analytical technique in structural analysis of these sulfated glycans. This is due to the fact that NMR-based analyses enable a series of achievements such as (i) accurate structure characterization/determination; (ii) measurements of parameters regarding molecular motion (dynamics); (iii) assessment of the 3D structures (usually assisted by computational techniques of Molecular Modeling and/or Molecular Dynamics) of the composing monosaccharides (ring conformers) and the overall conformational states of the glycan chains either free in solution or bound to proteins; and (iv) analysis of the resultant intermolecular complexes with functional proteins through either the protein or the carbohydrate perspective. In this review, after a general introduction about the principal NMR parameters utilized for achieving this set of structural information, discussion is given on NMR-based studies of some representative sulfated fucans, sulfated galactans, and glycosaminoglycans. Due to the growing number of studies concerning both structure and function of sulfated glycans and the widely use of NMR spectroscopy in such studies, a review paper discussing (i) the most experiments employed for analysis, (ii) procedures used in data interpretation, and (iii) the general aspects of the sulfated glycans, is timely in the literature.

Entities:  

Keywords:  NOE; glycosaminoglycans; spin relaxation; sulfated fucan; sulfated galactan

Mesh:

Substances:

Year:  2016        PMID: 27166778     DOI: 10.1080/07391102.2016.1171165

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  8 in total

Review 1.  Glycosaminoglycanomics: where we are.

Authors:  Sylvie Ricard-Blum; Frédérique Lisacek
Journal:  Glycoconj J       Date:  2016-11-30       Impact factor: 2.916

2.  Nuclear Magnetic Resonance Methods in Structural Characterization of Glycosaminoglycans.

Authors:  Vitor H Pomin; Barbara Mulloy
Journal:  Methods Mol Biol       Date:  2022

3.  Rigorous analysis of free solution glycosaminoglycan dynamics using simple, new tools.

Authors:  Balaji Nagarajan; Nehru Viji Sankaranarayanan; Umesh R Desai
Journal:  Glycobiology       Date:  2020-07-16       Impact factor: 4.313

Review 4.  Spatiotemporal diversity and regulation of glycosaminoglycans in cell homeostasis and human disease.

Authors:  Amrita Basu; Neil G Patel; Elijah D Nicholson; Ryan J Weiss
Journal:  Am J Physiol Cell Physiol       Date:  2022-03-16       Impact factor: 5.282

5.  Immunostimulatory Effect of Sulfated Galactans from the Green Seaweed Caulerpa cupressoides var. flabellata.

Authors:  Jefferson da Silva Barbosa; Diego Araújo Sabry; Cynthia Haynara Ferreira Silva; Dayanne Lopes Gomes; Arquimedes Paixão Santana-Filho; Guilherme Lanzi Sassaki; Hugo Alexandre Oliveira Rocha
Journal:  Mar Drugs       Date:  2020-04-29       Impact factor: 5.118

Review 6.  Pharmacological Activities of Sulfated Fucose-Rich Polysaccharides after Oral Administration: Perspectives for the Development of New Carbohydrate-Based Drugs.

Authors:  Roberto J C Fonseca; Paulo A S Mourão
Journal:  Mar Drugs       Date:  2021-07-27       Impact factor: 5.118

Review 7.  Analysis of the Glycosaminoglycan Chains of Proteoglycans.

Authors:  Yuefan Song; Fuming Zhang; Robert J Linhardt
Journal:  J Histochem Cytochem       Date:  2020-07-06       Impact factor: 2.479

Review 8.  Three-Dimensional Structures of Carbohydrates and Where to Find Them.

Authors:  Sofya I Scherbinina; Philip V Toukach
Journal:  Int J Mol Sci       Date:  2020-10-18       Impact factor: 5.923

  8 in total

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