Literature DB >> 27164840

Erratum to: 'Reference-free inference of tumor phylogenies from single-cell sequencing data'.

Ayshwarya Subramanian1, Russell Schwartz2.   

Abstract

Entities:  

Year:  2016        PMID: 27164840      PMCID: PMC4863360          DOI: 10.1186/s12864-016-2609-2

Source DB:  PubMed          Journal:  BMC Genomics        ISSN: 1471-2164            Impact factor:   3.969


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Unfortunately, the original version of this article [1] contained an error. Figures 2, 4 and 5 were incorrect and the captions for Figs. 4 and 5 were incorrect. Below are the correct figures and captions:
Fig. 2

Histogram of k-mer relative abundances. Both 20- and 25-mer relative abundance densities appear log-laplacian. These data included 20- and 25-mers found in all tumor cells. a Histogram of 20-mer relative abundances in log10 scale. b Histogram of 25-mer relative abundances in log10 scale

Fig. 4

20-mer bootstrap consensus neighbor-joining tree built from T10 primary breast tumor cells (prefix C), T16 primary (prefix P) and metastatic data (prefix M). Distinct groupings of cells are labeled as clusters

Fig. 5

20-mer bootstrap consensus neighbor-joining tree built from T16 primary (prefix P) and metastatic data (prefix M). Distinct groupings of cells are labeled as clusters

Histogram of k-mer relative abundances. Both 20- and 25-mer relative abundance densities appear log-laplacian. These data included 20- and 25-mers found in all tumor cells. a Histogram of 20-mer relative abundances in log10 scale. b Histogram of 25-mer relative abundances in log10 scale 20-mer bootstrap consensus neighbor-joining tree built from T10 primary breast tumor cells (prefix C), T16 primary (prefix P) and metastatic data (prefix M). Distinct groupings of cells are labeled as clusters 20-mer bootstrap consensus neighbor-joining tree built from T16 primary (prefix P) and metastatic data (prefix M). Distinct groupings of cells are labeled as clusters
  1 in total

1.  Reference-free inference of tumor phylogenies from single-cell sequencing data.

Authors:  Ayshwarya Subramanian; Russell Schwartz
Journal:  BMC Genomics       Date:  2015-11-10       Impact factor: 3.969

  1 in total
  1 in total

1.  Gene biomarker prediction in glioma by integrating scRNA-seq data and gene regulatory network.

Authors:  Guimin Qin; Longting Du; Yuying Ma; Yu Yin; Liming Wang
Journal:  BMC Med Genomics       Date:  2021-12-04       Impact factor: 3.063

  1 in total

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