Literature DB >> 27163942

Regulating Competing Supramolecular Interactions Using Ligand Concentration.

Abraham J P Teunissen, Tim F E Paffen, Gianfranco Ercolani1, Tom F A de Greef, E W Meijer.   

Abstract

The complexity of biomolecular systems inevitably leads to a degree of competition between the noncovalent interactions involved. However, the outcome of biological processes is generally very well-defined often due to the competition of these interactions. In contrast, specificity in synthetic supramolecular systems is usually based on the presence of a minimum set of alternative assembly pathways. While the latter might simplify the system, it prevents the selection of specific structures and thereby limits the adaptivity of the system. Therefore, artificial systems containing competing interactions are vital to stimulate the development of more adaptive and lifelike synthetic systems. Here, we present a detailed study on the self-assembly behavior of a C2v-symmetrical tritopic molecule, functionalized with three self-complementary ureidopyrimidinone (UPy) motifs. Due to a shorter linker connecting one of these UPys, two types of cycles with different stabilities can be formed, which subsequently dimerize intermolecularly via the third UPy. The UPy complementary 2,7-diamido-1,8-naphthyridine (NaPy) motif was gradually added to this mixture in order to examine its effect on the cycle distribution. As a result of the C2v-symmetry of the tritopic UPy, together with small differences in binding strength, the cycle ratio can be regulated by altering the concentration of NaPy. We show that this ratio can be increased to an extent where one type of cycle is formed almost exclusively.

Entities:  

Year:  2016        PMID: 27163942     DOI: 10.1021/jacs.6b03421

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

Review 1.  Embracing nanomaterials' interactions with the innate immune system.

Authors:  Abraham J P Teunissen; Marianne E Burnett; Geoffrey Prévot; Emma D Klein; Daniel Bivona; Willem J M Mulder
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2021-04-13

2.  Supramolecular polymerization of a ureidopyrimidinone-based [2]catenane prepared via ring-closing metathesis.

Authors:  Abraham J P Teunissen; José Augusto Berrocal; Christiaan H W A Corbet; E W Meijer
Journal:  J Polym Sci A Polym Chem       Date:  2017-07-03       Impact factor: 2.702

3.  H-Bond Self-Assembly: Folding versus Duplex Formation.

Authors:  Diego Núñez-Villanueva; Giulia Iadevaia; Alexander E Stross; Michael A Jinks; Jonathan A Swain; Christopher A Hunter
Journal:  J Am Chem Soc       Date:  2017-05-04       Impact factor: 15.419

4.  Ligand-Receptor Interaction Modulates the Energy Landscape of Enzyme-Instructed Self-Assembly of Small Molecules.

Authors:  Richard Haburcak; Junfeng Shi; Xuewen Du; Dan Yuan; Bing Xu
Journal:  J Am Chem Soc       Date:  2016-11-15       Impact factor: 15.419

5.  Model-driven engineering of supramolecular buffering by multivalency.

Authors:  Tim F E Paffen; Abraham J P Teunissen; Tom F A de Greef; E W Meijer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-20       Impact factor: 11.205

  5 in total

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