Literature DB >> 27162187

A computational model to predict the immune system activation by citrus-derived vaccine adjuvants.

Francesco Pappalardo3, Epifanio Fichera2, Nicoletta Paparone3, Alessandro Lombardo3, Marzio Pennisi4, Giulia Russo5, Marco Leotta1, Francesco Pappalardo3, Alessandro Pedretti6, Francesco De Fiore7, Santo Motta4.   

Abstract

MOTIVATION: Vaccines represent the most effective and cost-efficient weapons against a wide range of diseases. Nowadays new generation vaccines based on subunit antigens reduce adverse effects in high risk individuals. However, vaccine antigens are often poor immunogens when administered alone. Adjuvants represent a good strategy to overcome such hurdles, indeed they are able to: enhance the immune response; allow antigens sparing; accelerate the specific immune response; and increase vaccine efficacy in vulnerable groups such as newborns, elderly or immuno-compromised people. However, due to safety concerns and adverse reactions, there are only a few adjuvants approved for use in humans. Moreover, in practice current adjuvants sometimes fail to confer adequate stimulation. Hence, there is an imperative need to develop novel adjuvants that overcome the limitations of the currently available licensed adjuvants.
RESULTS: We developed a computational framework that provides a complete pipeline capable of predicting the best citrus-derived adjuvants for enhancing the immune system response using, as a target disease model, influenza A infection. In silico simulations suggested a good immune efficacy of specific citrus-derived adjuvant (Beta Sitosterol) that was then confirmed in vivoAvailability: The model is available visiting the following URL: http://vaima.dmi.unict.it/AdjSim CONTACT: francesco.pappalardo@unict.it; fp@francescopappalardo.net.
© The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

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Year:  2016        PMID: 27162187     DOI: 10.1093/bioinformatics/btw293

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  12 in total

1.  Translatability and transferability of in silico models: Context of use switching to predict the effects of environmental chemicals on the immune system.

Authors:  Francesco Pappalardo; Giulia Russo; Emanuela Corsini; Alicia Paini; Andrew Worth
Journal:  Comput Struct Biotechnol J       Date:  2022-03-26       Impact factor: 6.155

2.  Combining agent based-models and virtual screening techniques to predict the best citrus-derived vaccine adjuvants against human papilloma virus.

Authors:  Marzio Pennisi; Giulia Russo; Silvia Ravalli; Francesco Pappalardo
Journal:  BMC Bioinformatics       Date:  2017-12-28       Impact factor: 3.169

Review 3.  Of Mice and Men: Comparative Analysis of Neuro-Inflammatory Mechanisms in Human and Mouse Using Cause-and-Effect Models.

Authors:  Alpha Tom Kodamullil; Anandhi Iyappan; Reagon Karki; Sumit Madan; Erfan Younesi; Martin Hofmann-Apitius
Journal:  J Alzheimers Dis       Date:  2017       Impact factor: 4.472

4.  A methodological approach for using high-level Petri Nets to model the immune system response.

Authors:  Marzio Pennisi; Salvatore Cavalieri; Santo Motta; Francesco Pappalardo
Journal:  BMC Bioinformatics       Date:  2016-12-22       Impact factor: 3.169

5.  In silico/In vivo analysis of high-risk papillomavirus L1 and L2 conserved sequences for development of cross-subtype prophylactic vaccine.

Authors:  Ali Namvar; Azam Bolhassani; Gholamreza Javadi; Zahra Noormohammadi
Journal:  Sci Rep       Date:  2019-10-23       Impact factor: 4.379

6.  The Potential of Computational Modeling to Predict Disease Course and Treatment Response in Patients with Relapsing Multiple Sclerosis.

Authors:  Francesco Pappalardo; Giulia Russo; Marzio Pennisi; Giuseppe Alessandro Parasiliti Palumbo; Giuseppe Sgroi; Santo Motta; Davide Maimone
Journal:  Cells       Date:  2020-03-01       Impact factor: 6.600

7.  In silico trials: Verification, validation and uncertainty quantification of predictive models used in the regulatory evaluation of biomedical products.

Authors:  Marco Viceconti; Francesco Pappalardo; Blanca Rodriguez; Marc Horner; Jeff Bischoff; Flora Musuamba Tshinanu
Journal:  Methods       Date:  2020-01-25       Impact factor: 3.608

8.  In silico trial to test COVID-19 candidate vaccines: a case study with UISS platform.

Authors:  Giulia Russo; Marzio Pennisi; Epifanio Fichera; Santo Motta; Giuseppina Raciti; Marco Viceconti; Francesco Pappalardo
Journal:  BMC Bioinformatics       Date:  2020-12-14       Impact factor: 3.169

9.  Moving forward through the in silico modeling of tuberculosis: a further step with UISS-TB.

Authors:  Giulia Russo; Giuseppe Sgroi; Giuseppe Alessandro Parasiliti Palumbo; Marzio Pennisi; Miguel A Juarez; Pere-Joan Cardona; Santo Motta; Kenneth B Walker; Epifanio Fichera; Marco Viceconti; Francesco Pappalardo
Journal:  BMC Bioinformatics       Date:  2020-12-14       Impact factor: 3.169

Review 10.  Current Strategies and Applications for Precision Drug Design.

Authors:  Chen Wang; Pan Xu; Luyu Zhang; Jing Huang; Kongkai Zhu; Cheng Luo
Journal:  Front Pharmacol       Date:  2018-07-18       Impact factor: 5.810

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