| Literature DB >> 27161113 |
Lianqiang Che1,2, Peilin Liu3,4, Zhengguo Yang3,4, Long Che3,4, Liang Hu3,4, Linlin Qin3,4, Ru Wang3,4, Zhengfeng Fang3,4, Yan Lin3,4, Shengyu Xu3,4, Bin Feng3,4, Jian Li3,4, De Wu3,4.
Abstract
BACKGROUND: The objective of this study was to investigate the effects of maternal high fat intake on intestinal development and transcriptional profile.Entities:
Keywords: Cancer; DNA microarray; Immune; Maternal nutrition; Offspring
Mesh:
Substances:
Year: 2016 PMID: 27161113 PMCID: PMC4862081 DOI: 10.1186/s12944-016-0261-0
Source DB: PubMed Journal: Lipids Health Dis ISSN: 1476-511X Impact factor: 3.876
Primer sequences of genes selected for analysis by real-time RT-PCR
| Genes | GenBank accession | Primer sequence (5′ ~ 3′) | Product length (bp) | Tm (°C) |
|---|---|---|---|---|
| HSPA1L | NM_001123128.1 | F:CGCTTTGACCTGACTGGAAT | 120 | 60 |
| R:CTTGCCTGTGCTCTTGTCC | ||||
| CD8A | NM_001001907.1 | F:GCTGGACACCCGTTACATCT | 100 | 60 |
| R:CGAGCAGAAATAGTAGCCTTGG | ||||
| CD40 | NM_214194.1 | F:GGTTCGTCTGCCTCTGAAGT | 104 | 60 |
| R:GGCTGTTTGTTGGGTATTGG | ||||
| PSTPIP1 | NM_001244186.1 | F:CTCCTTTGACTCCCTGAAGC | 114 | 60 |
| R:TTCTGCCTCTCTCGGAACTC | ||||
| SLA-DQA1 | NM_001114062.2 | F:TGGACCTGGAGAAGAAGGAG | 132 | 60 |
| R:TGGAGCGTTTAGTCACGATG | ||||
| STAT2 | NM_213889.1 | F:TCCCAAATCACAAGGTTTCC | 109 | 60 |
| R:CAGATAGCCGAAGTCCCAAA | ||||
| GK | NM_001143708.1 | F:GCAGGTAGATGGAGGGATGA | 107 | 60 |
| R:CCAGGGCAGTTGTTTCAGG | ||||
| BMP7 | NM_001105290.1 | F:TCCAGGGCAAGCACAACT | 172 | 60 |
| R:TCGGTGAGGAAGTGGCTATC | ||||
| PIK3R5 | NM_213851.1 | F:CTGTCATTCCCTCCTTCCAA | 117 | 60 |
| R:GCCACCCTCCTCTTACTCTG | ||||
| SLA-DRB1 | NM_001113695.1 | F:TCTGCTCTTTGTTGCTGTGG | 120 | 60 |
| R:GGATGCTTGCTTGGAGTGTC | ||||
| THY1 | XM_005667396.1 | F:GGCATCGCTCTCTTGCTAAC | 125 | 60 |
| R:GGCAGGTTGGTGGTATTCTC | ||||
| TGFB1 | NM_214015.1 | F:AAGCGGCAACCAAATCTATG | 113 | 60 |
| R:CCCGAGAGAGCAATACAGGT | ||||
| SLA-1 | NM_001097431.1 | F:GTCAAGGAAACCGCACAGAT | 113 | 60 |
| R:CCCAAGTAGCAGCCAAACAT | ||||
| CD74 | NM_213774.1 | F:ATGGACGGTGTGAACTGGA | 100 | 60 |
| R:GAACCTCAAAGGGTGTCTCCT | ||||
| SOD2 | XM_005659113.1 | F:CCTTCACTTTGCCTCTTGGT | 127 | 60 |
| R:CACCGTTAGGGCTCAGATTT | ||||
| ACTA2 | XM_005671254.1 | F:GTCCACCTTCCAGCAAATGT | 105 | 60 |
| R:AGACAGCGAGCAGGGTAAGT | ||||
| SULT1E1 | NM_213992.1 | F:TGAAGTCTCATCTGCCACCT | 101 | 60 |
| R:AGAAACGACCACATCCTTGG | ||||
| β-actin | DQ845171.1 | F:GGCGCCCAGCACGAT | 66 | 60 |
| R:CCGATCCACACGGAGTACTTG |
HSPA1L heat shock 70 kDa protein 1-like, CD8A CD8a molecule (CD8A), CD40 CD40 molecule, TNF receptor superfamily member 5; SLA-DQA1 MHC class II histocompatibility antigen SLA-DQA, PSTPIP1 proline-serine-threonine phosphatase interacting protein 1, STAT2 signal transducer and activator of transcription 2, GK glycerol kinase, BMP7 bone morphogenetic protein 7, PIK3R5 phosphoinositide-3-kinase, regulatory subunit 5, SLA-DRB1 MHC class II histocompatibility antigen SLA-DRB1, THY1 Thy-1 cell surface antigen, TGFB1 transforming growth factor, beta 1, SLA-1 MHC class I antigen 1, CD74 CD74 molecule, major histocompatibility complex, class II invariant chain, SOD2 superoxide dismutase 2, mitochondrial, ACTA2 actin, alpha 2, smooth muscle, aorta, SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1
Fig. 1Effect of maternal high fat intake on the intestinal morphology of fetus (n = 4)
Fig. 2Effects of maternal high fat intake on digestive enzyme activities of fetal intestine (n = 4). The symbol “*” in figure represents there was significant difference at 5 % level (P < 0.05)
Maternal high fat intake markedly regulated intestinal gene expressions related to immune response, signal transduction, cancer and metabolism
| Gene Symbola | Gene name | Fold changeb |
|
|---|---|---|---|
| CCR7 | chemokine (C-C motif) receptor 7 | −2.94 | 0.023 |
| HSPA1L | heat shock 70 kDa protein 1-like | −2.50 | 0.016 |
| CD8A | CD8a molecule (CD8A) | −2.44 | 0.035 |
| CD3E | CD3e molecule, epsilon (CD3-TCR complex) (CD3E) | −2.27 | 0.033 |
| STK17B | serine/threonine kinase 17b | −2.00 | 0.026 |
| CD40 | CD40 molecule, TNF receptor superfamily member 5 | −2.00 | 0.011 |
| CD2 | CD2 molecule | −1.89 | 0.026 |
| SLA-DQA1 | MHC class II histocompatibility antigen SLA-DQA | −1.85 | 0.002 |
| PSTPIP1 | proline-serine-threonine phosphatase interacting protein 1 | −1.85 | 0.007 |
| SLAMF6 | SLAM family member 6 | −1.82 | 0.046 |
| TP53INP1 | tumor protein p53 inducible nuclear protein 1 | −1.82 | 0.000 |
| FAM78A | family with sequence similarity 78, member A | −1.79 | 0.015 |
| BCL2A1 | BCL2-related protein A1 | −1.79 | 0.023 |
| ARHGAP25 | Rho GTPase activating protein 25 | −1.75 | 0.011 |
| CD1.1 | CD1 antigen | −1.72 | 0.007 |
| STAT2 | signal transducer and activator of transcription 2 | −1.69 | 0.042 |
| ARHGAP30 | Rho GTPase activating protein 30 | −1.69 | 0.036 |
| BCL2A1 | BCL2-related protein A1 | −1.69 | 0.040 |
| IL10RB | interleukin 10 receptor, beta | −1.67 | 0.013 |
| GK | glycerol kinase | −1.64 | 0.041 |
| LTB | mRNA, clone:MLN010057G03, expressed in mesenteric lymph nodes | −1.64 | 0.031 |
| LCP1 | lymphocyte cytosolic protein 1 (L-plastin) | −1.61 | 0.014 |
| PGM1 | phosphoglucomutase 1 | −1.61 | 0.045 |
| NRROS | negative regulator of reactive oxygen species | −1.59 | 0.049 |
| CYTH4 | cytohesin 4 | −1.59 | 0.039 |
| BMP7 | bone morphogenetic protein 7 | −1.59 | 0.024 |
| PIK3R5 | phosphoinositide-3-kinase, regulatory subunit 5 | −1.56 | 0.009 |
| RGS14 | regulator of G-protein signaling 14 | −1.54 | 0.049 |
| GLRX | glutaredoxin (thioltransferase) | −1.54 | 0.025 |
| SLA-DRB1 | MHC class II histocompatibility antigen SLA-DRB1 | −1.52 | 0.028 |
| LPAR2 | lysophosphatidic acid receptor 2 | −1.52 | 0.016 |
| THY1 | Thy-1 cell surface antigen | −1.52 | 0.028 |
| TGFB1 | transforming growth factor, beta 1 | −1.52 | 0.022 |
| BAZ1A | bromodomain adjacent to zinc finger domain, 1A | −1.52 | 0.024 |
| CCDC69 | coiled-coil domain containing 69 | −1.49 | 0.048 |
| LRRK2 | leucine-rich repeat kinase 2 | −1.49 | 0.022 |
| SLA-1 | MHC class I antigen 1 | −1.49 | 0.018 |
| CD74 | CD74 molecule, major histocompatibility complex, class II invariant chain | −1.49 | 0.038 |
| SOD2 | superoxide dismutase 2, mitochondrial | 1.51 | 0.004 |
| ILF2 | interleukin enhancer binding factor 2 | 1.51 | 0.021 |
| CYP39A1 | cytochrome P450, family 39, subfamily A, polypeptide 1 | 1.52 | 0.043 |
| JPH4 | junctophilin 4 | 1.52 | 0.026 |
| ATCAY | ataxia, cerebellar, Cayman type | 1.53 | 0.008 |
| MATN2 | mRNA, clone:OVR010041A03, expressed in ovary | 1.53 | 0.016 |
| CRMP1 | Uncharacterized protein | 1.54 | 0.039 |
| RTDR1 | mRNA, clone:UTR010010H08, expressed in uterus. | 1.55 | 0.001 |
| SPARCL1 | SPARC-like 1 (hevin) | 1.56 | 0.035 |
| MATN2 | mRNA, clone:OVR010041A03, expressed in ovary | 1.56 | 0.019 |
| CCN2 | connective tissue growth factor | 1.57 | 0.042 |
| TUSC3 | mRNA, clone: HTMT10103A12, expressed in hypothalamus | 1.58 | 0.009 |
| ID4 | inhibitor of DNA binding 4, dominant negative helix-loop-helix protein | 1.58 | 0.024 |
| SPARC | secreted protein, acidic, cysteine-rich (osteonectin) | 1.60 | 0.035 |
| MEP1A | meprin A, alpha (PABA peptide hydrolase) | 1.63 | 0.018 |
| ARL10 | ADP-ribosylation factor-like 10 | 1.64 | 0.036 |
| STMN2 | stathmin-like 2 | 1.64 | 0.039 |
| ACTA2 | actin, alpha 2, smooth muscle, aorta | 1.66 | 0.016 |
| SHISA2 | shisa family member 2 | 1.76 | 0.029 |
| UCHL1 | ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) | 1.79 | 0.014 |
| OCRL | oculocerebrorenal syndrome of Lowe | 2.01 | 0.008 |
| SULT1E1 | sulfotransferase family 1E, estrogen-preferring, member 1 | 2.59 | 0.013 |
aGenes were selected from the Kyoto Encyclopedia of Genes and Genomes pathways related to intestinal immune response, signal transduction, cancer and metabolism (http://www.genome.jp/kegg/pathway.html)
bThe fold change was based on the ratio of HF group to CON group, n = 4 subpools/group
Fig. 3Heatmap of the 61 differentially expressed genes. The HF diet: s1_NS, s3-NS, s5-NS, s7-NS; The CON diet: s9_NS, s11-NS, s13-NS, s15-NS
Differentially expressed genes in fetal intestine by maternal high fat intake and validated by qPCR
| Fold changeb | |||
|---|---|---|---|
| Gene symbola | cDNA Microarray | qPCR |
|
| ACTA2 | 1.66 | 1.10 | 0.246 |
| SULT1E1 | 2.59 | 1.88 | 0.002 |
| SOD2 | 1.51 | 1.75 | 0.036 |
| BMP7 | −1.59 | −1.09 | 0.722 |
| CD40 | −2.00 | −1.74 | 0.116 |
| CD74 | −1.49 | −1.36 | 0.029 |
| CD8A | −2.44 | −1.85 | 0.049 |
| GK | −1.64 | −1.33 | 0.041 |
| HSPAIL | −2.50 | −1.60 | 0.027 |
| PIK3R5 | −1.56 | −1.07 | 0.644 |
| PSTPIP1 | −1.85 | −1.48 | 0.083 |
| SLA-1 | −1.49 | −1.45 | 0.097 |
| SLA-DQA1 | −1.85 | −1.79 | 0.003 |
| SLA-DRB1 | −1.52 | −1.33 | 0.136 |
| STAT2 | −1.69 | −1.18 | 0.125 |
| TGF-β | −1.52 | −1.19 | 0.296 |
| THY1 | −1.52 | −1.29 | 0.118 |
aGenes were selected on the basis of their crucial role on regulating intestinal immune response (i.e.SLA-DRB1,SLA-DQA,HSPA1L,CD74,CD40), colorectal cancer (i.e.TGF-β,PIK3R5), signal transduction (i.e. PSTPIP1,BMP7,STAT2) and metabolism (i.e.GK, SULT1E1). These genes by DNA microarray were all significantly regulated (P < 0.05, at least 1.5 fold change)
bThe fold change was based on the ratio of HF group to CON group, n = 4 subpools/group
Fig. 4Signal pathway enrichment analysis of fetal intestine by HF diet relative to CON diet (n = 4 subpools/group). The pathway terms were according to the down-regulated genes for certain biological processes, enriched categories are those identified as significantly enriched after multiple testing. * P < 0.05, ** P < 0.01. The value by horizontal axis resulted from negative value of Log (enrichment test P value, base 10)
The markedly modified signal pathways in fetal intestine of gilts fed HF diet
| Name | Hits a | Total b | Percent | Enrichment test |
|---|---|---|---|---|
|
| ||||
| Allograft rejection | 6 | 34 | 17.65 % | 0.000 |
| Antigen processing and presentation | 8 | 64 | 12.50 % | 0.000 |
| Autoimmune thyroid disease | 6 | 45 | 13.33 % | 0.000 |
| Cell adhesion molecules | 8 | 71 | 11.27 % | 0.000 |
| Cytokine-cytokine receptor interaction | 10 | 142 | 7.04 % | 0.000 |
| Hematopoietic cell lineage | 7 | 63 | 11.11 % | 0.000 |
| Intestinal immune network for IgA production | 7 | 48 | 14.58 % | 0.000 |
| Leishmania infection | 8 | 63 | 12.70 % | 0.000 |
| Viral myocarditis | 9 | 46 | 19.57 % | 0.000 |
| Graft-versus-host disease | 6 | 57 | 10.53 % | 1E-04 |
| Neuroactive ligand-receptor interaction | 10 | 174 | 5.75 % | 1E-04 |
| Type I diabetes mellitus | 5 | 40 | 12.50 % | 2E-04 |
| Asthma | 5 | 50 | 10.00 % | 5E-04 |
| Jak-STAT signaling pathway | 6 | 82 | 7.32 % | 6E-04 |
| Primary immunodeficiency | 4 | 37 | 10.81 % | 0.0013 |
| Pathways in cancer | 7 | 140 | 5.00 % | 0.0017 |
| Hypertrophic cardiomyopathy | 4 | 43 | 9.30 % | 0.0022 |
| Systemic lupus erythematosus | 5 | 86 | 5.81 % | 0.0043 |
| Adipocytokine signaling pathway | 4 | 55 | 7.27 % | 0.005 |
| Chemokine signaling pathway | 5 | 90 | 5.56 % | 0.0052 |
| Colorectal cancer | 3 | 31 | 9.68 % | 0.0072 |
| Fc gamma R-mediated phagocytosis | 3 | 32 | 9.38 % | 0.0078 |
| T cell receptor signaling pathway | 4 | 63 | 6.35 % | 0.0078 |
| Leukocyte transendothelial migration | 4 | 71 | 5.63 % | 0.0115 |
| Acute myeloid leukemia | 3 | 39 | 7.69 % | 0.0129 |
| Dilated cardiomyopathy | 3 | 40 | 7.50 % | 0.0137 |
| Glycerolipid metabolism | 3 | 41 | 7.32 % | 0.0146 |
| Arrhythmogenic right ventricular cardiomyopathy | 3 | 47 | 6.38 % | 0.0205 |
| Nitrogen metabolism | 2 | 19 | 10.53 % | 0.0246 |
| TGF-beta signaling pathway | 3 | 55 | 5.45 % | 0.0302 |
| Endometrial cancer | 2 | 22 | 9.09 % | 0.0316 |
| Aldosterone-regulated sodium reabsorption | 2 | 24 | 8.33 % | 0.0366 |
| Type II diabetes mellitus | 2 | 24 | 8.33 % | 0.0366 |
aHits mean the number of differential expressed genes within the particular GO term
bTotal: the total number of genes within the particular GO term