Literature DB >> 27159715

DNA Mini-barcoding for wildlife trade control: a case study on identification of highly processed animal materials.

Safia Janjua1,2, Kainaat William1,2, Inayat Ullah Malik3, Javed Mehr4.   

Abstract

Although DNA barcoding is an efficient tool for species identification, however, its efficiency is uncertain for samples having degraded DNA and incomplete isolation/amplification of COI gene fragment (>500 bp). DNA mini-barcoding is a solution to this problem because small DNA fragment of COI genes is used for species identification. Twelve highly processed, chemically treated and finished animal skin (coats, tanned skins) and fur (mufflers) samples, received from the Sindh Wildlife Department, Pakistan, were subjected to DNA mini-barcoding. Eight mufflers belonged to Vulpes vulpes, one coat to Ursus thibetanus, one tanned skin to Lutra sumatrana, and one muffler to Vulpes sp. Origin of only one coat sample remained unidentified, success rate of 92% indicative of the fact that the mini barcoding technique can be used as a substitute of conventional barcoding where full length barcode (∼650 bp Folmer region) cannot be generated.

Entities:  

Keywords:  DNA mini barcoding; lutra sp; vulpes sp; wildlife trade

Mesh:

Substances:

Year:  2016        PMID: 27159715     DOI: 10.3109/24701394.2016.1155051

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  4 in total

1.  Specific DNA mini-barcoding for identification of Gekko gecko and its products.

Authors:  Yanyan Su; Dandan Ding; Mengjie Yao; Lan Wu; Gangqiang Dong; Dong Zhang; Shilin Chen; Li Xiang
Journal:  Chin Med       Date:  2020-09-29       Impact factor: 5.455

Review 2.  DNA Barcoding for the Identification and Authentication of Animal Species in Traditional Medicine.

Authors:  Fan Yang; Fei Ding; Hong Chen; Mingqi He; Shixin Zhu; Xin Ma; Li Jiang; Haifeng Li
Journal:  Evid Based Complement Alternat Med       Date:  2018-04-22       Impact factor: 2.629

3.  Single Fragment or Bulk Soil DNA Metabarcoding: Which is Better for Characterizing Biological Taxa Found in Surface Soils for Sample Separation?

Authors:  Laura M Boggs; Melissa K R Scheible; Gustavo Machado; Kelly A Meiklejohn
Journal:  Genes (Basel)       Date:  2019-06-06       Impact factor: 4.096

Review 4.  Benefits and Limitations of DNA Barcoding and Metabarcoding in Herbal Product Authentication.

Authors:  Ancuta Cristina Raclariu; Michael Heinrich; Mihael Cristin Ichim; Hugo de Boer
Journal:  Phytochem Anal       Date:  2017-09-14       Impact factor: 3.373

  4 in total

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