Literature DB >> 27159315

Changes in Transcriptome-Wide Gene Expression of Anterior Cruciate Ligament Tears Based on Time From Injury.

Robert H Brophy1, Eric D Tycksen2, Linda J Sandell3, Muhammad Farooq Rai4.   

Abstract

BACKGROUND: Anterior cruciate ligament (ACL) tears are a common injury. The healing potential of the injured ACL is poorly understood and is considered limited. Therefore, most ACL tears that are treated surgically undergo reconstruction rather than repair. However, there has been renewed interest recently in repairing ACL tears despite unanswered questions regarding the healing capacity of the ACL. HYPOTHESIS: Gene expression in the injured ACL varies with time from injury. STUDY
DESIGN: Descriptive laboratory study.
METHODS: Transcriptome-wide expression profiles of 24 human ACL remnants recovered at the time of surgical reconstruction were analyzed using the Agilent human 8x60K microarray platform. Gene ontology was performed on differentially expressed transcripts based on time from injury (acute, <3 months; intermediate, 3-12 months; chronic, >12 months). A subset of transcripts with large fold changes in expression between any 2 categories was validated via microfluidic digital polymerase chain reaction.
RESULTS: Numerous transcripts representing important biological processes were differentially expressed by time from injury. The most significant changes were noted between the acute and chronic groups. Expression of several extracellular matrix genes- namely, POSTN, COL5A1, COL1A1, and COL12A1-was lower in the chronic tears compared with acute and intermediate tears. In acute tears, processes representing angiogenesis and stem cell differentiation were affected. In intermediate tears, processes representing stem cell proliferation concomitant with cellular component organization/cellular localization were altered. In ACL tears more than 12 months out from injury, processes denoting myosin filament organization, cellular component organization/cell localization, and extracellular matrix organization were affected.
CONCLUSION: These findings are consistent with initial repair activity in the injured ACL, which declines with time from injury. Individual genes identified in this study, such as periostin, deserve further investigation into their role in tissue repair. CLINICAL RELEVANCE: The decreased healing capacity of ACL tears over time is relevant to the development of effective techniques for repairing ACL tears and may have some significance for ACL reconstruction techniques as well. The potential for healing appears to be greatest in acute ACL tears, suggesting this window should be the focus of research for ACL repair.
© 2016 The Author(s).

Entities:  

Keywords:  ACL; anterior cruciate ligament; extracellular matrix; healing; microarray profiling; time from injury

Mesh:

Year:  2016        PMID: 27159315     DOI: 10.1177/0363546516643810

Source DB:  PubMed          Journal:  Am J Sports Med        ISSN: 0363-5465            Impact factor:   6.202


  15 in total

1.  Gene expression in human meniscal tears has limited association with early degenerative changes in knee articular cartilage.

Authors:  Robert H Brophy; Linda J Sandell; James M Cheverud; Muhammad Farooq Rai
Journal:  Connect Tissue Res       Date:  2016-07-19       Impact factor: 3.417

2.  Duration of symptoms prior to partial meniscectomy is not associated with the expression of osteoarthritis genes in the injured meniscus.

Authors:  Robert H Brophy; Eric J Schmidt; Lei Cai; Muhammad Farooq Rai
Journal:  J Orthop Res       Date:  2020-01-13       Impact factor: 3.494

3.  Transcriptome comparison of meniscus from patients with and without osteoarthritis.

Authors:  R H Brophy; B Zhang; L Cai; R W Wright; L J Sandell; M F Rai
Journal:  Osteoarthritis Cartilage       Date:  2017-12-16       Impact factor: 6.576

4.  Advantages of RNA-seq compared to RNA microarrays for transcriptome profiling of anterior cruciate ligament tears.

Authors:  Muhammad Farooq Rai; Eric D Tycksen; Linda J Sandell; Robert H Brophy
Journal:  J Orthop Res       Date:  2017-08-29       Impact factor: 3.494

5.  Distinct expression pattern of periostin splice variants in chondrocytes and ligament progenitor cells.

Authors:  Lei Cai; Robert H Brophy; Eric D Tycksen; Xin Duan; Ryan M Nunley; Muhammad Farooq Rai
Journal:  FASEB J       Date:  2019-04-16       Impact factor: 5.191

6.  Proteomic analysis of synovial fluid identifies periostin as a biomarker for anterior cruciate ligament injury.

Authors:  R H Brophy; L Cai; X Duan; Q Zhang; R R Townsend; R M Nunley; F Guilak; M F Rai
Journal:  Osteoarthritis Cartilage       Date:  2019-08-17       Impact factor: 6.576

7.  Otto Aufranc Award: Identification of Key Molecular Players in the Progression of Hip Osteoarthritis Through Transcriptomes and Epigenetics.

Authors:  Cecilia Pascual-Garrido; Tomoyuki Kamenaga; Robert H Brophy; Jie Shen; Regis J O'Keefe; John C Clohisy
Journal:  J Arthroplasty       Date:  2022-03-12       Impact factor: 4.435

8.  Molecular influence of anterior cruciate ligament tear remnants on chondrocytes: a biologic connection between injury and osteoarthritis.

Authors:  N Chinzei; R H Brophy; X Duan; L Cai; R M Nunley; L J Sandell; M F Rai
Journal:  Osteoarthritis Cartilage       Date:  2018-01-31       Impact factor: 6.576

9.  [Effectiveness of partial anterior cruciate ligament suture repair with wide awake local anesthesia no tourniquet technique].

Authors:  Yu Wei; Xing Yun; Yang Liu; Min Wei
Journal:  Zhongguo Xiu Fu Chong Jian Wai Ke Za Zhi       Date:  2021-03-15

10.  COLIA1 + 1245 G > T Sp1 Binding Site Polymorphism is Not Associated with ACL Injury Risks Among Indian Athletes.

Authors:  Manish Shukla; Rahul Gupta; Vivek Pandey; Pramod Kumar Tiwari; Rabbind Singh Amrathlal
Journal:  Indian J Orthop       Date:  2020-04-28       Impact factor: 1.251

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