Literature DB >> 27158565

Type 2 Diabetes Mellitus Trajectories and Associated Risks.

Wonsuk Oh1, Era Kim1, M Regina Castro2, Pedro J Caraballo3, Vipin Kumar4, Michael S Steinbach4, Gyorgy J Simon5.   

Abstract

Disease progression models, statistical models that assess a patient's risk of diabetes progression, are popular tools in clinical practice for prevention and management of chronic conditions. Most, if not all, models currently in use are based on gold standard clinical trial data. The relatively small sample size available from clinical trial limits these models only considering the patient's state at the time of the assessment and ignoring the trajectory, the sequence of events, that led up to the state. Recent advances in the adoption of electronic health record (EHR) systems and the large sample size they contain have paved the way to build disease progression models that can take trajectories into account, leading to increasingly accurate and personalized assessment. To address these problems, we present a novel method to observe trajectories directly. We demonstrate the effectiveness of the proposed method by studying type 2 diabetes mellitus (T2DM) trajectories. Specifically, using EHR data for a large population-based cohort, we identified a typical trajectory that most people follow, which is a sequence of diseases from hyperlipidemia (HLD) to hypertension (HTN), impaired fasting glucose (IFG), and T2DM. In addition, we also show that patients who follow different trajectories can face significantly increased or decreased risk.

Entities:  

Keywords:  big data analytics; data mining

Year:  2016        PMID: 27158565      PMCID: PMC4851215          DOI: 10.1089/big.2015.0029

Source DB:  PubMed          Journal:  Big Data        ISSN: 2167-6461            Impact factor:   2.128


  12 in total

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Authors:  David M Eddy; Leonard Schlessinger
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Authors: 
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Review 3.  Mechanisms of diabetic complications.

Authors:  Josephine M Forbes; Mark E Cooper
Journal:  Physiol Rev       Date:  2013-01       Impact factor: 37.312

4.  Electronic medical records for genetic research: results of the eMERGE consortium.

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Journal:  Sci Transl Med       Date:  2011-04-20       Impact factor: 17.956

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Authors:  J Tuomilehto; J Lindström; J G Eriksson; T T Valle; H Hämäläinen; P Ilanne-Parikka; S Keinänen-Kiukaanniemi; M Laakso; A Louheranta; M Rastas; V Salminen; M Uusitupa
Journal:  N Engl J Med       Date:  2001-05-03       Impact factor: 91.245

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Authors:  William C Knowler; Elizabeth Barrett-Connor; Sarah E Fowler; Richard F Hamman; John M Lachin; Elizabeth A Walker; David M Nathan
Journal:  N Engl J Med       Date:  2002-02-07       Impact factor: 91.245

8.  How do we define cure of diabetes?

Authors:  John B Buse; Sonia Caprio; William T Cefalu; Antonio Ceriello; Stefano Del Prato; Silvio E Inzucchi; Sue McLaughlin; Gordon L Phillips; R Paul Robertson; Francesco Rubino; Richard Kahn; M Sue Kirkman
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Journal:  Arch Intern Med       Date:  2007-05-28

Review 10.  History of the Rochester Epidemiology Project: half a century of medical records linkage in a US population.

Authors:  Walter A Rocca; Barbara P Yawn; Jennifer L St Sauver; Brandon R Grossardt; L Joseph Melton
Journal:  Mayo Clin Proc       Date:  2012-11-28       Impact factor: 7.616

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  14 in total

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2.  Stacked classifiers for individualized prediction of glycemic control following initiation of metformin therapy in type 2 diabetes.

Authors:  Dennis H Murphree; Elaheh Arabmakki; Che Ngufor; Curtis B Storlie; Rozalina G McCoy
Journal:  Comput Biol Med       Date:  2018-10-16       Impact factor: 4.589

3.  Estimating Disease Onset Time by Modeling Lab Result Trajectories via Bayes Networks.

Authors:  Wonsuk Oh; Pranjul Yadav; Vipin Kumar; Pedro J Caraballo; M Regina Castro; Michael S Steinbach; Gyorgy J Simon
Journal:  IEEE Int Conf Healthc Inform       Date:  2017-09-14

4.  A Computational Method for Learning Disease Trajectories From Partially Observable EHR Data.

Authors:  Wonsuk Oh; Michael S Steinbach; M Regina Castro; Kevin A Peterson; Vipin Kumar; Pedro J Caraballo; Gyorgy J Simon
Journal:  IEEE J Biomed Health Inform       Date:  2021-07-27       Impact factor: 7.021

5.  Systems and precision medicine approaches to diabetes heterogeneity: a Big Data perspective.

Authors:  Enrico Capobianco
Journal:  Clin Transl Med       Date:  2017-07-25

Review 6.  Machine Learning and Data Mining Methods in Diabetes Research.

Authors:  Ioannis Kavakiotis; Olga Tsave; Athanasios Salifoglou; Nicos Maglaveras; Ioannis Vlahavas; Ioanna Chouvarda
Journal:  Comput Struct Biotechnol J       Date:  2017-01-08       Impact factor: 7.271

7.  Multi-Task Learning to Identify Outcome-Specific Risk Factors that Distinguish Individual Micro and Macrovascular Complications of Type 2 Diabetes.

Authors:  Era Kim; David S Pieczkiewicz; M Regina Castro; Pedro J Caraballo; Gyorgy J Simon
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2018-05-18

8.  Effects of type 2 diabetes mellitus on the pharmacokinetics of berberine in rats.

Authors:  Yuzhen Jia; Binger Xu; Jisen Xu
Journal:  Pharm Biol       Date:  2017-12       Impact factor: 3.503

9.  Patient similarity analytics for explainable clinical risk prediction.

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10.  Identification of risk factors for patients with diabetes: diabetic polyneuropathy case study.

Authors:  Oleg Metsker; Kirill Magoev; Alexey Yakovlev; Stanislav Yanishevskiy; Georgy Kopanitsa; Sergey Kovalchuk; Valeria V Krzhizhanovskaya
Journal:  BMC Med Inform Decis Mak       Date:  2020-08-24       Impact factor: 2.796

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